RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	RPA34	P47006	233 aa	Predicted RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	TAX4	P47030	604 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	COP1	P53622	1201 aa	Known RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	MPP6	P53725	186 aa	Predicted RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	FAR8	Q05040	523 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	GGA1	Q06336	557 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	THI20	Q08224	551 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	OSW1	Q08692	278 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	RPS10A	Q08745	105 aa	Predicted RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	DDC1	Q08949	612 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
RCM1	YNL022C	PUT2	P07275	575 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	IMA3	P0CW40	589 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	IMA4	P0CW41	589 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
RCM1	YNL022C	NDI1	P32340	513 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	TKL2	P33315	681 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	CBP4	P37267	147 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	YBR056W	P38081	501 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	ROT2	P38138	954 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	BNA4	P38169	460 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	YBR032W	P38223	100 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	SHE3	P38272	425 aa	Known RBP	4.14	□□□□□ -1.75
RCM1	YNL022C	SMF2	P38778	549 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	MLH1	P38920	769 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	CDC1	P40986	491 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	POP1	P41812	875 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	ECM27	P47144	725 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	YTP1	P53584	459 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	IMA2	Q08295	589 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	GPM2	Q12008	311 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	YLL056C	Q12177	298 aa		4.14	□□□□□ -1.75
RCM1	YNL022C	HAP2	P06774	265 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	PRB1	P09232	635 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	RPI1	P23250	407 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	CDC10	P25342	322 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	FAA1	P30624	700 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	CRM1	P30822	1084 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	ECM25	P32525	599 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	LOS1	P33418	1100 aa	Predicted RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	MTR2	P34232	184 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	KKQ8	P36004	724 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	MIA40	P36046	403 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	SPC97	P38863	823 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	YFR018C	P43599	363 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	RPS10B	P46784	105 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	YIP5	P53108	310 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	ATP23	P53722	227 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	KTR5	P53966	522 aa	Predicted RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	KTR6	P54070	446 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	SSQ1	Q05931	657 aa	Predicted RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	ATG26	Q06321	1198 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	BCP1	Q06338	283 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	TPO3	Q06451	622 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	YPL225W	Q08971	146 aa	Known RBP	4.13	□□□□□ -1.75
RCM1	YNL022C	NDJ1	Q12366	352 aa		4.13	□□□□□ -1.75
RCM1	YNL022C	YER145C-A	A0A023PYF4	145 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	ILV5	P06168	395 aa	Known RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	STE3	P06783	470 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	SSC1	P0CS90	654 aa	Known RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	ARO3	P14843	370 aa	Known RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	PRP16	P15938	1071 aa	Predicted RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	MET16	P18408	261 aa	Predicted RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	RHB1	P25378	209 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	FLO10	P36170	1169 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	LIN1	P38852	340 aa	Predicted RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	AIM18	P38884	321 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	ELP2	P42935	788 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	GCN20	P43535	752 aa	Known RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	YFL012W	P43580	148 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	GUF1	P46943	645 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	TOM22	P49334	152 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	PEX31	P53203	462 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	BIO4	P53630	237 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	SPG3	Q04398	127 aa	Predicted RBP	4.12	□□□□□ -1.75
RCM1	YNL022C	COQ11	Q05892	277 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	PDR8	Q06149	701 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	YET3	Q07451	203 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	MCH4	Q08268	501 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	TAF10	Q12030	206 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RCM1	YNL022C	LDB17	Q12342	491 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	HRT3	Q12347	344 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
RCM1	YNL022C	PEP4	P07267	405 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	RIP1	P08067	215 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	FUS3	P16892	353 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	MAK32	P23060	363 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	GID7	P25569	745 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ITR1	P30605	584 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	RAD5	P32849	1169 aa	Predicted RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	TPO5	P36029	618 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ASC1	P38011	319 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	ETR1	P38071	380 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	HMT1	P38074	348 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	KAP104	P38217	918 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	MNL1	P38888	796 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	FHL1	P39521	936 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ATM1	P40416	690 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	EMC2	P47133	292 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms