RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YBL111CQ3E7Y5 667 aa3.71□□□□□ -1.82
PUB1YNL016W TDH2P00358 332 aaKnown RBP3.7□□□□□ -1.82
PUB1YNL016W TDH3P00359 332 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
PUB1YNL016W COX2P00410 251 aa3.7□□□□□ -1.82
PUB1YNL016W STE11P23561 717 aa3.7□□□□□ -1.82
PUB1YNL016W GSY2P27472 705 aa3.7□□□□□ -1.82
PUB1YNL016W CWP1P28319 239 aa3.7□□□□□ -1.82
PUB1YNL016W EMP70P32802 667 aa3.7□□□□□ -1.82
PUB1YNL016W SPT10P35208 640 aa3.7□□□□□ -1.82
PUB1YNL016W SOR1P35497 357 aaKnown RBP3.7□□□□□ -1.82
PUB1YNL016W AIM29P36154 155 aa3.7□□□□□ -1.82
PUB1YNL016W YHR182WP38870 785 aa3.7□□□□□ -1.82
PUB1YNL016W RPS10BP46784 105 aaKnown RBP3.7□□□□□ -1.82
PUB1YNL016W BNA3P47039 444 aaKnown RBP3.7□□□□□ -1.82
PUB1YNL016W DRN1P53255 507 aaKnown RBP3.7□□□□□ -1.82
PUB1YNL016W COG2P53271 262 aa3.7□□□□□ -1.82
PUB1YNL016W ESBP6P53918 673 aa3.7□□□□□ -1.82
PUB1YNL016W TAF12Q03761 539 aa3.7□□□□□ -1.82
PUB1YNL016W SYO1Q07395 620 aa3.7□□□□□ -1.82
PUB1YNL016W SOR2Q07786 357 aa3.7□□□□□ -1.82
PUB1YNL016W ENB1Q08299 606 aa3.7□□□□□ -1.82
PUB1YNL016W AAD15Q08361 143 aa3.7□□□□□ -1.82
PUB1YNL016W CMC2Q3E7A4 109 aa3.7□□□□□ -1.82
PUB1YNL016W YPT1P01123 206 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W GDH1P07262 454 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W TRP4P07285 380 aaPredicted RBP3.69□□□□□ -1.82
PUB1YNL016W CHO1P08456 276 aa3.69□□□□□ -1.82
PUB1YNL016W MET3P08536 511 aa3.69□□□□□ -1.82
PUB1YNL016W RPL4AP10664 362 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W FRS2P15625 503 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W PRP16P15938 1071 aaPredicted RBP3.69□□□□□ -1.82
PUB1YNL016W PRP21P32524 280 aaPredicted RBP3.69□□□□□ -1.82
PUB1YNL016W PDR3P33200 976 aa3.69□□□□□ -1.82
PUB1YNL016W TSA1P34760 196 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W RTC2P38279 296 aa3.69□□□□□ -1.82
PUB1YNL016W STP2P38704 541 aa3.69□□□□□ -1.82
PUB1YNL016W INM1P38710 295 aa3.69□□□□□ -1.82
PUB1YNL016W RTT107P38850 1070 aa3.69□□□□□ -1.82
PUB1YNL016W CCT2P39076 527 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W PRM9P39551 298 aa3.69□□□□□ -1.82
PUB1YNL016W SCD6P45978 349 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
PUB1YNL016W YJR011CP47086 261 aaPredicted RBP3.69□□□□□ -1.82
PUB1YNL016W RPL4BP49626 362 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W YGR151CP53287 111 aa3.69□□□□□ -1.82
PUB1YNL016W SLT2Q00772 484 aa3.69□□□□□ -1.82
PUB1YNL016W RSM23Q01163 450 aa3.69□□□□□ -1.82
PUB1YNL016W RLI1Q03195 608 aaKnown RBP3.69□□□□□ -1.82
PUB1YNL016W YDR132CQ03900 495 aa3.69□□□□□ -1.82
PUB1YNL016W BNA7Q04066 261 aa3.69□□□□□ -1.82
PUB1YNL016W DLT1Q04216 342 aa3.69□□□□□ -1.82
PUB1YNL016W PLM2Q04383 521 aa3.69□□□□□ -1.82
PUB1YNL016W HRD3Q05787 833 aa3.69□□□□□ -1.82
PUB1YNL016W IRC13Q08630 104 aa3.69□□□□□ -1.82
PUB1YNL016W YOR365CQ08844 703 aa3.69□□□□□ -1.82
PUB1YNL016W BTS1Q12051 335 aa3.69□□□□□ -1.82
PUB1YNL016W GET4Q12125 312 aa3.69□□□□□ -1.82
PUB1YNL016W YDL177CQ12257 170 aa3.69□□□□□ -1.82
PUB1YNL016W BRR1Q99177 341 aaPredicted RBP3.69□□□□□ -1.82
PUB1YNL016W RPL18AP0CX49 186 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W RPL18BP0CX50 186 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W RAP1P11938 827 aa3.68□□□□□ -1.82
PUB1YNL016W YCP4P25349 247 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W RPS5P26783 225 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W PRR1P28708 518 aa3.68□□□□□ -1.82
PUB1YNL016W ACH1P32316 526 aa3.68□□□□□ -1.82
PUB1YNL016W YKL071WP36086 256 aa3.68□□□□□ -1.82
PUB1YNL016W APL3P38065 1025 aa3.68□□□□□ -1.82
PUB1YNL016W MAL32P38158 584 aa3.68□□□□□ -1.82
PUB1YNL016W TCM62P38228 572 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W ANS1P38832 159 aa3.68□□□□□ -1.82
PUB1YNL016W FET3P38993 636 aa3.68□□□□□ -1.82
PUB1YNL016W PCF11P39081 626 aaPredicted RBP3.68□□□□□ -1.82
PUB1YNL016W FMP52P40008 231 aa3.68□□□□□ -1.82
PUB1YNL016W LCP5P40079 357 aaPredicted RBP3.68□□□□□ -1.82
PUB1YNL016W SAS2P40963 338 aa3.68□□□□□ -1.82
PUB1YNL016W SNG1P46950 547 aa3.68□□□□□ -1.82
PUB1YNL016W PHO86P46956 311 aa3.68□□□□□ -1.82
PUB1YNL016W KAP114P53067 1004 aa3.68□□□□□ -1.82
PUB1YNL016W MAL12P53341 584 aa3.68□□□□□ -1.82
PUB1YNL016W IMP4P53941 290 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W ARK1P53974 638 aa3.68□□□□□ -1.82
PUB1YNL016W BET4Q00618 327 aa3.68□□□□□ -1.82
PUB1YNL016W APM1Q00776 475 aaPredicted RBP3.68□□□□□ -1.82
PUB1YNL016W GCN5Q03330 439 aa3.68□□□□□ -1.82
PUB1YNL016W NUP53Q03790 475 aa3.68□□□□□ -1.82
PUB1YNL016W YMR087WQ04299 284 aa3.68□□□□□ -1.82
PUB1YNL016W FUS2Q05670 677 aa3.68□□□□□ -1.82
PUB1YNL016W YLR224WQ05947 369 aa3.68□□□□□ -1.82
PUB1YNL016W SHS1Q07657 551 aa3.68□□□□□ -1.82
PUB1YNL016W THP1Q08231 455 aa3.68□□□□□ -1.82
PUB1YNL016W RAX1Q08760 435 aa3.68□□□□□ -1.82
PUB1YNL016W USV1Q12132 391 aa3.68□□□□□ -1.82
PUB1YNL016W RNH203Q12338 110 aa3.68□□□□□ -1.82
PUB1YNL016W PRP46Q12417 451 aaPredicted RBP3.68□□□□□ -1.82
PUB1YNL016W PRP8P33334 2413 aaKnown RBP3.68□□□□□ -1.82
PUB1YNL016W CHS1P08004 1131 aa3.67□□□□□ -1.82
PUB1YNL016W MET16P18408 261 aaPredicted RBP3.67□□□□□ -1.82
PUB1YNL016W VPS1P21576 704 aaKnown RBP3.67□□□□□ -1.82
PUB1YNL016W GPI12P23797 304 aa3.67□□□□□ -1.82
PUB1YNL016W MSK1P32048 576 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms