RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C CBP4P37267 147 aa4.34□□□□□ -1.71
CCS1YMR038C TPA1P40032 644 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C APQ12P40532 138 aa4.34□□□□□ -1.71
CCS1YMR038C RPL10P41805 221 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C YRB1P41920 201 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C SNO3P43544 222 aa4.34□□□□□ -1.71
CCS1YMR038C IRC7P43623 340 aa4.34□□□□□ -1.71
CCS1YMR038C MSY1P48527 492 aa4.34□□□□□ -1.71
CCS1YMR038C ROG1P53118 685 aa4.34□□□□□ -1.71
CCS1YMR038C ERG13P54839 491 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C RPL22BP56628 122 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C YDR209CQ03480 137 aa4.34□□□□□ -1.71
CCS1YMR038C GLO2Q05584 274 aa4.34□□□□□ -1.71
CCS1YMR038C YET3Q07451 203 aa4.34□□□□□ -1.71
CCS1YMR038C YPL245WQ12179 454 aaKnown RBP4.34□□□□□ -1.71
CCS1YMR038C RRP42Q12277 265 aaPredicted RBP4.34□□□□□ -1.71
CCS1YMR038C YPL247CQ12523 523 aa4.34□□□□□ -1.71
CCS1YMR038C RSR1P13856 272 aa4.33□□□□□ -1.72
CCS1YMR038C TRX3P25372 127 aa4.33□□□□□ -1.72
CCS1YMR038C TAH1P25638 111 aaPredicted RBP4.33□□□□□ -1.72
CCS1YMR038C PMT2P31382 759 aa4.33□□□□□ -1.72
CCS1YMR038C RIM1P32445 135 aaKnown RBP4.33□□□□□ -1.72
CCS1YMR038C UBC6P33296 250 aaPredicted RBP4.33□□□□□ -1.72
CCS1YMR038C PTH2P34222 208 aa4.33□□□□□ -1.72
CCS1YMR038C ASK1P35734 292 aa4.33□□□□□ -1.72
CCS1YMR038C ETR1P38071 380 aa4.33□□□□□ -1.72
CCS1YMR038C OM14P38325 134 aa4.33□□□□□ -1.72
CCS1YMR038C AXL2P38928 823 aa4.33□□□□□ -1.72
CCS1YMR038C CCT4P39078 528 aaKnown RBP4.33□□□□□ -1.72
CCS1YMR038C VPS52P39904 641 aa4.33□□□□□ -1.72
CCS1YMR038C INA22P40576 216 aa4.33□□□□□ -1.72
CCS1YMR038C PAC11P40960 533 aa4.33□□□□□ -1.72
CCS1YMR038C SEC27P41811 889 aaKnown RBP4.33□□□□□ -1.72
CCS1YMR038C PSA1P41940 361 aaKnown RBP4.33□□□□□ -1.72
CCS1YMR038C BIO3P50277 480 aa4.33□□□□□ -1.72
CCS1YMR038C YNL260CP53846 198 aa4.33□□□□□ -1.72
CCS1YMR038C MRPL13Q02204 264 aa4.33□□□□□ -1.72
CCS1YMR038C BOP2Q06150 570 aa4.33□□□□□ -1.72
CCS1YMR038C RIF2Q06208 395 aa4.33□□□□□ -1.72
CCS1YMR038C YLR177WQ06251 628 aa4.33□□□□□ -1.72
CCS1YMR038C RRP40Q08285 240 aaKnown RBP4.33□□□□□ -1.72
CCS1YMR038C MDM32Q12171 622 aa4.33□□□□□ -1.72
CCS1YMR038C MDY2Q12285 212 aa4.33□□□□□ -1.72
CCS1YMR038C LEU4P06208 619 aaKnown RBP4.32□□□□□ -1.72
CCS1YMR038C COR1P07256 457 aa4.32□□□□□ -1.72
CCS1YMR038C RPB4P20433 221 aaPredicted RBP4.32□□□□□ -1.72
CCS1YMR038C CMK1P27466 446 aaKnown RBP4.32□□□□□ -1.72
CCS1YMR038C SSH4P32343 579 aa4.32□□□□□ -1.72
CCS1YMR038C SUI1P32911 108 aaKnown RBP4.32□□□□□ -1.72
CCS1YMR038C YKL100CP34248 587 aa4.32□□□□□ -1.72
CCS1YMR038C MUD2P36084 527 aaKnown RBP4.32□□□□□ -1.72
CCS1YMR038C BNA1P47096 177 aa4.32□□□□□ -1.72
CCS1YMR038C RPN14P53196 417 aa4.32□□□□□ -1.72
CCS1YMR038C OAZ1Q02803 292 aa4.32□□□□□ -1.72
CCS1YMR038C NHP10Q03435 203 aa4.32□□□□□ -1.72
CCS1YMR038C YMR209CQ03648 457 aa4.32□□□□□ -1.72
CCS1YMR038C HPT1Q04178 221 aaKnown RBP4.32□□□□□ -1.72
CCS1YMR038C FAR10Q06001 478 aa4.32□□□□□ -1.72
CCS1YMR038C YOR376WQ08900 122 aa4.32□□□□□ -1.72
CCS1YMR038C YRM1Q12340 786 aa4.32□□□□□ -1.72
CCS1YMR038C BLM10P43583 2143 aa4.31□□□□□ -1.72
CCS1YMR038C SSC1P0CS90 654 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C MSS116P15424 664 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C REC107P21651 314 aa4.31□□□□□ -1.72
CCS1YMR038C CRM1P30822 1084 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C RSM22P36056 628 aa4.31□□□□□ -1.72
CCS1YMR038C ASC1P38011 319 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C YBR139WP38109 508 aa4.31□□□□□ -1.72
CCS1YMR038C APE4P38821 490 aa4.31□□□□□ -1.72
CCS1YMR038C CCT2P39076 527 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C UTP25P40498 721 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C SEC28P40509 296 aaKnown RBP4.31□□□□□ -1.72
CCS1YMR038C MIC19P43594 170 aa4.31□□□□□ -1.72
CCS1YMR038C GCD14P46959 383 aaPredicted RBP4.31□□□□□ -1.72
CCS1YMR038C STE24P47154 453 aa4.31□□□□□ -1.72
CCS1YMR038C SHY1P53266 389 aa4.31□□□□□ -1.72
CCS1YMR038C KTR5P53966 522 aaPredicted RBP4.31□□□□□ -1.72
CCS1YMR038C SLT2Q00772 484 aa4.31□□□□□ -1.72
CCS1YMR038C RMI1Q02685 241 aa4.31□□□□□ -1.72
CCS1YMR038C HER1Q12276 1246 aa4.31□□□□□ -1.72
CCS1YMR038C CRC1Q12289 327 aa4.31□□□□□ -1.72
CCS1YMR038C RGS2Q99188 309 aa4.31□□□□□ -1.72
CCS1YMR038C ATP2P00830 511 aaKnown RBP4.3□□□□□ -1.72
CCS1YMR038C SPT3P06844 337 aa4.3□□□□□ -1.72
CCS1YMR038C TY2A-LR1P0C2J4 438 aa4.3□□□□□ -1.72
CCS1YMR038C TY2A-FP0CX61 438 aa4.3□□□□□ -1.72
CCS1YMR038C TY2A-GR2P0CX62 438 aa4.3□□□□□ -1.72
CCS1YMR038C GCY1P14065 312 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CCS1YMR038C GLK1P17709 500 aaKnown RBP4.3□□□□□ -1.72
CCS1YMR038C YAP1P19880 650 aaKnown RBP4.3□□□□□ -1.72
CCS1YMR038C TY2A-CP25383 438 aa4.3□□□□□ -1.72
CCS1YMR038C KRE6P32486 720 aa4.3□□□□□ -1.72
CCS1YMR038C CBF5P33322 483 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CCS1YMR038C RRN3P36070 627 aa4.3□□□□□ -1.72
CCS1YMR038C YER034WP40022 185 aaKnown RBP4.3□□□□□ -1.72
CCS1YMR038C PHM8P40025 321 aa4.3□□□□□ -1.72
CCS1YMR038C PEP8P40335 379 aa4.3□□□□□ -1.72
CCS1YMR038C SMK1P41808 388 aa4.3□□□□□ -1.72
CCS1YMR038C IRC6P43615 237 aa4.3□□□□□ -1.72
CCS1YMR038C IBD2P53892 351 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms