RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W DFG10P40526 253 aa3.7□□□□□ -1.82
SPO20YMR017W TSA2Q04120 196 aa3.7□□□□□ -1.82
SPO20YMR017W NAG1Q8TGN9 163 aa3.7□□□□□ -1.82
SPO20YMR017W MEX67Q99257 599 aaKnown RBP3.7□□□□□ -1.82
SPO20YMR017W SCH9P11792 824 aaKnown RBP3.69□□□□□ -1.82
SPO20YMR017W PSO2P30620 661 aa3.69□□□□□ -1.82
SPO20YMR017W SWI3P32591 825 aa3.69□□□□□ -1.82
SPO20YMR017W SPO23P33757 523 aa3.69□□□□□ -1.82
SPO20YMR017W UTH1P36135 365 aa3.69□□□□□ -1.82
SPO20YMR017W DAD2P36162 133 aa3.69□□□□□ -1.82
SPO20YMR017W ADH5P38113 351 aaKnown RBP3.69□□□□□ -1.82
SPO20YMR017W SEC27P41811 889 aaKnown RBP3.69□□□□□ -1.82
SPO20YMR017W YET2Q04210 160 aa3.69□□□□□ -1.82
SPO20YMR017W YER186CP40101 306 aa3.68□□□□□ -1.82
SPO20YMR017W PEX27Q08580 376 aa3.68□□□□□ -1.82
SPO20YMR017W YDL199CQ12407 687 aa3.68□□□□□ -1.82
SPO20YMR017W SOD1P00445 154 aaKnown RBP3.67□□□□□ -1.82
SPO20YMR017W UBA1P22515 1024 aaKnown RBP3.67□□□□□ -1.82
SPO20YMR017W FAA1P30624 700 aaKnown RBP3.67□□□□□ -1.82
SPO20YMR017W YBL028CP38202 106 aa3.67□□□□□ -1.82
SPO20YMR017W SKI8Q02793 397 aaPredicted RBP3.67□□□□□ -1.82
SPO20YMR017W YPR078CQ06813 372 aa3.67□□□□□ -1.82
SPO20YMR017W HSP26P15992 214 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SPO20YMR017W MRPL8P22353 238 aa3.66□□□□□ -1.82
SPO20YMR017W PHO84P25297 587 aaKnown RBP3.66□□□□□ -1.82
SPO20YMR017W CDC50P25656 391 aa3.66□□□□□ -1.82
SPO20YMR017W PRS1P32895 427 aaKnown RBP3.66□□□□□ -1.82
SPO20YMR017W OM14P38325 134 aa3.66□□□□□ -1.82
SPO20YMR017W GAT3Q07928 141 aa3.66□□□□□ -1.82
SPO20YMR017W NFI1Q12216 726 aa3.66□□□□□ -1.82
SPO20YMR017W DBR1P24309 405 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W MSK1P32048 576 aa3.65□□□□□ -1.83
SPO20YMR017W IES6P32617 166 aa3.65□□□□□ -1.83
SPO20YMR017W SEC9P40357 651 aa3.65□□□□□ -1.83
SPO20YMR017W LYS12P40495 371 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W AIP1P46680 615 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W TRF5P48561 642 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W RET3P53600 189 aa3.65□□□□□ -1.83
SPO20YMR017W YNR068CP53754 272 aa3.65□□□□□ -1.83
SPO20YMR017W REX2P54964 269 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W YHC1Q05900 231 aaKnown RBP3.65□□□□□ -1.83
SPO20YMR017W CHA1P25379 360 aaKnown RBP3.64□□□□□ -1.83
SPO20YMR017W VPH1P32563 840 aaKnown RBP3.64□□□□□ -1.83
SPO20YMR017W LAS1P36146 502 aaPredicted RBP3.64□□□□□ -1.83
SPO20YMR017W PFS1P38872 237 aa3.64□□□□□ -1.83
SPO20YMR017W TIM17P39515 158 aa3.64□□□□□ -1.83
SPO20YMR017W SNL1P40548 159 aa3.64□□□□□ -1.83
SPO20YMR017W UTP6Q02354 440 aaKnown RBP3.64□□□□□ -1.83
SPO20YMR017W SHS1Q07657 551 aa3.64□□□□□ -1.83
SPO20YMR017W SFG1Q12507 346 aa3.64□□□□□ -1.83
SPO20YMR017W POT1P27796 417 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SPO20YMR017W SSE1P32589 693 aaKnown RBP3.63□□□□□ -1.83
SPO20YMR017W CTK3P46963 296 aaPredicted RBP3.63□□□□□ -1.83
SPO20YMR017W MPS2P53159 387 aa3.63□□□□□ -1.83
SPO20YMR017W YMR010WQ03687 405 aa3.63□□□□□ -1.83
SPO20YMR017W SPT7P35177 1332 aa3.63□□□□□ -1.83
SPO20YMR017W COX4P04037 155 aa3.62□□□□□ -1.83
SPO20YMR017W PRB1P09232 635 aa3.62□□□□□ -1.83
SPO20YMR017W RPS18AP0CX55 146 aaKnown RBP3.62□□□□□ -1.83
SPO20YMR017W RPS18BP0CX56 146 aaPredicted RBP3.62□□□□□ -1.83
SPO20YMR017W ZRC1P20107 442 aa3.62□□□□□ -1.83
SPO20YMR017W EFB1P32471 206 aaKnown RBP3.62□□□□□ -1.83
SPO20YMR017W VAM7P32912 316 aa3.62□□□□□ -1.83
SPO20YMR017W LSM12P38828 187 aaKnown RBP3.62□□□□□ -1.83
SPO20YMR017W LCP5P40079 357 aaPredicted RBP3.62□□□□□ -1.83
SPO20YMR017W CIN2P46670 268 aa3.62□□□□□ -1.83
SPO20YMR017W AIM33Q04516 312 aa3.62□□□□□ -1.83
SPO20YMR017W DBP9Q06218 594 aaKnown RBP3.62□□□□□ -1.83
SPO20YMR017W BSC6Q08280 497 aa3.62□□□□□ -1.83
SPO20YMR017W HMS1Q12398 434 aa3.62□□□□□ -1.83
SPO20YMR017W YOR338WQ99326 363 aa3.62□□□□□ -1.83
SPO20YMR017W MAS2P11914 482 aa3.61□□□□□ -1.83
SPO20YMR017W RDS1P25611 832 aa3.61□□□□□ -1.83
SPO20YMR017W RPL16AP26784 199 aaKnown RBP3.61□□□□□ -1.83
SPO20YMR017W MRP21P38175 177 aa3.61□□□□□ -1.83
SPO20YMR017W KEG1P43614 200 aa3.61□□□□□ -1.83
SPO20YMR017W RPA34P47006 233 aaPredicted RBP3.61□□□□□ -1.83
SPO20YMR017W YNL143CP53908 130 aa3.61□□□□□ -1.83
SPO20YMR017W YLH47Q06493 454 aa3.61□□□□□ -1.83
SPO20YMR017W DNL4Q08387 944 aaPredicted RBP3.61□□□□□ -1.83
SPO20YMR017W FSH3Q99369 266 aa3.61□□□□□ -1.83
SPO20YMR017W MAS1P10507 462 aa3.6□□□□□ -1.83
SPO20YMR017W CMK2P22517 447 aa3.6□□□□□ -1.83
SPO20YMR017W GIT1P25346 518 aa3.6□□□□□ -1.83
SPO20YMR017W DEP1P31385 405 aa3.6□□□□□ -1.83
SPO20YMR017W PTK1P36002 662 aaPredicted RBP3.6□□□□□ -1.83
SPO20YMR017W SIF2P38262 535 aa3.6□□□□□ -1.83
SPO20YMR017W HEM14P40012 539 aa3.6□□□□□ -1.83
SPO20YMR017W IGD1P43598 195 aa3.6□□□□□ -1.83
SPO20YMR017W MRPS16Q02608 121 aa3.6□□□□□ -1.83
SPO20YMR017W MSC3Q05812 728 aa3.6□□□□□ -1.83
SPO20YMR017W YDL109CQ12103 647 aa3.6□□□□□ -1.83
SPO20YMR017W MCT1Q12283 360 aa3.6□□□□□ -1.83
SPO20YMR017W YOR012WQ12351 137 aa3.6□□□□□ -1.83
SPO20YMR017W AIM45Q12480 344 aaKnown RBP3.6□□□□□ -1.83
SPO20YMR017W HEM4P06174 275 aa3.59□□□□□ -1.83
SPO20YMR017W RPS16AP0CX51 143 aaKnown RBP3.59□□□□□ -1.83
SPO20YMR017W RPS16BP0CX52 143 aaKnown RBP3.59□□□□□ -1.83
SPO20YMR017W THR4P16120 514 aaKnown RBP3.59□□□□□ -1.83
SPO20YMR017W YHR182WP38870 785 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms