RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MSH5Q12175 901 aa8.53□□□□□ -1.04
SEC61YLR378C YGK3Q12222 375 aaPredicted RBP8.53□□□□□ -1.04
SEC61YLR378C ENA5Q12691 1091 aa8.53□□□□□ -1.04
SEC61YLR378C SNF6P18888 332 aa8.52□□□□□ -1.05
SEC61YLR378C ITR2P30606 609 aa8.52□□□□□ -1.05
SEC61YLR378C OAC1P32332 324 aa8.52□□□□□ -1.05
SEC61YLR378C MRPL15P36523 253 aa8.52□□□□□ -1.05
SEC61YLR378C CFD1P40558 293 aa8.52□□□□□ -1.05
SEC61YLR378C ALK1P43633 760 aaKnown RBP8.52□□□□□ -1.05
SEC61YLR378C ERG13P54839 491 aaKnown RBP8.52□□□□□ -1.05
SEC61YLR378C SMA2Q04658 369 aa8.52□□□□□ -1.05
SEC61YLR378C RNH1Q04740 348 aa8.52□□□□□ -1.05
SEC61YLR378C YLR446WQ06204 433 aa8.52□□□□□ -1.05
SEC61YLR378C NTG2Q08214 380 aa8.52□□□□□ -1.05
SEC61YLR378C BSC6Q08280 497 aa8.52□□□□□ -1.05
SEC61YLR378C YOR365CQ08844 703 aa8.52□□□□□ -1.05
SEC61YLR378C PNS1Q12412 539 aa8.52□□□□□ -1.05
SEC61YLR378C SKM1Q12469 655 aa8.52□□□□□ -1.05
SEC61YLR378C REP1P03871 373 aa8.51□□□□□ -1.05
SEC61YLR378C MCK1P21965 375 aaKnown RBP8.51□□□□□ -1.05
SEC61YLR378C UTH1P36135 365 aa8.51□□□□□ -1.05
SEC61YLR378C FES1P38260 290 aa8.51□□□□□ -1.05
SEC61YLR378C IFA38P38286 347 aa8.51□□□□□ -1.05
SEC61YLR378C YBR238CP38330 731 aaKnown RBP8.51□□□□□ -1.05
SEC61YLR378C DDI1P40087 428 aa8.51□□□□□ -1.05
SEC61YLR378C APS3P47064 194 aa8.51□□□□□ -1.05
SEC61YLR378C JHD2P47156 728 aaPredicted RBP8.51□□□□□ -1.05
SEC61YLR378C EFM3P47163 339 aa8.51□□□□□ -1.05
SEC61YLR378C BAT2P47176 376 aaKnown RBP8.51□□□□□ -1.05
SEC61YLR378C EXG2P52911 562 aa8.51□□□□□ -1.05
SEC61YLR378C SYF2P53277 215 aaPredicted RBP8.51□□□□□ -1.05
SEC61YLR378C NUP49Q02199 472 aa8.51□□□□□ -1.05
SEC61YLR378C CTL1Q03220 320 aaKnown RBP8.51□□□□□ -1.05
SEC61YLR378C IES3Q12345 250 aa8.51□□□□□ -1.05
SEC61YLR378C PTR2P32901 601 aa8.5□□□□□ -1.05
SEC61YLR378C ARC19P33204 171 aaKnown RBP8.5□□□□□ -1.05
SEC61YLR378C PET112P33893 541 aa8.5□□□□□ -1.05
SEC61YLR378C EXO84P38261 753 aa8.5□□□□□ -1.05
SEC61YLR378C ARN2P38724 620 aa8.5□□□□□ -1.05
SEC61YLR378C YHR097CP38809 366 aaKnown RBP8.5□□□□□ -1.05
SEC61YLR378C MDM31P38880 579 aa8.5□□□□□ -1.05
SEC61YLR378C BUR6P40096 142 aa8.5□□□□□ -1.05
SEC61YLR378C NTA1P40354 457 aa8.5□□□□□ -1.05
SEC61YLR378C ALB1P47019 175 aaPredicted RBP8.5□□□□□ -1.05
SEC61YLR378C TRM9P49957 279 aa8.5□□□□□ -1.05
SEC61YLR378C MAL11P53048 616 aa8.5□□□□□ -1.05
SEC61YLR378C YGR054WP53235 642 aaKnown RBP8.5□□□□□ -1.05
SEC61YLR378C DBP6P53734 629 aaKnown RBP8.5□□□□□ -1.05
SEC61YLR378C COS1P53822 381 aa8.5□□□□□ -1.05
SEC61YLR378C YKR011CQ02209 353 aa8.5□□□□□ -1.05
SEC61YLR378C SNZ1Q03148 297 aa8.5□□□□□ -1.05
SEC61YLR378C URC2Q04411 772 aa8.5□□□□□ -1.05
SEC61YLR378C GAL83Q04739 417 aa8.5□□□□□ -1.05
SEC61YLR378C YLR456WQ06199 204 aa8.5□□□□□ -1.05
SEC61YLR378C YOR389WQ08912 624 aa8.5□□□□□ -1.05
SEC61YLR378C YDL211CQ12121 372 aa8.5□□□□□ -1.05
SEC61YLR378C SIA1Q12212 622 aa8.5□□□□□ -1.05
SEC61YLR378C PUP2P32379 260 aa8.49□□□□□ -1.05
SEC61YLR378C DCG1P32460 244 aa8.49□□□□□ -1.05
SEC61YLR378C KAP122P32767 1081 aa8.49□□□□□ -1.05
SEC61YLR378C DHR2P36009 735 aaPredicted RBP8.49□□□□□ -1.05
SEC61YLR378C YPK3P38070 525 aa8.49□□□□□ -1.05
SEC61YLR378C SRO77P38163 1010 aa8.49□□□□□ -1.05
SEC61YLR378C FMP23P38231 175 aa8.49□□□□□ -1.05
SEC61YLR378C RPS20P38701 121 aaKnown RBP8.49□□□□□ -1.05
SEC61YLR378C ECM34P38728 170 aa8.49□□□□□ -1.05
SEC61YLR378C PEX18P38855 283 aa8.49□□□□□ -1.05
SEC61YLR378C GID8P40208 455 aa8.49□□□□□ -1.05
SEC61YLR378C FIN1Q03898 291 aa8.49□□□□□ -1.05
SEC61YLR378C MRX10Q05648 414 aa8.49□□□□□ -1.05
SEC61YLR378C GSH2Q08220 491 aa8.49□□□□□ -1.05
SEC61YLR378C SKI7Q08491 747 aaPredicted RBP8.49□□□□□ -1.05
SEC61YLR378C RBD2Q12270 262 aa8.49□□□□□ -1.05
SEC61YLR378C MMP1Q12372 583 aa8.49□□□□□ -1.05
SEC61YLR378C YPR015CQ12531 247 aa8.49□□□□□ -1.05
SEC61YLR378C YDL007C-AQ2V2Q0 85 aa8.49□□□□□ -1.05
SEC61YLR378C CAR2P07991 424 aaKnown RBP8.48□□□□□ -1.05
SEC61YLR378C LYP1P32487 611 aa8.48□□□□□ -1.05
SEC61YLR378C ORC2P32833 620 aa8.48□□□□□ -1.05
SEC61YLR378C TAF14P35189 244 aa8.48□□□□□ -1.05
SEC61YLR378C TPO5P36029 618 aa8.48□□□□□ -1.05
SEC61YLR378C VPS52P39904 641 aa8.48□□□□□ -1.05
SEC61YLR378C GDI1P39958 451 aaKnown RBP8.48□□□□□ -1.05
SEC61YLR378C ZRG8P40021 1076 aa8.48□□□□□ -1.05
SEC61YLR378C ALR2P43553 858 aa8.48□□□□□ -1.05
SEC61YLR378C IDS2P46958 469 aa8.48□□□□□ -1.05
SEC61YLR378C SSY5P47002 699 aa8.48□□□□□ -1.05
SEC61YLR378C NUP42P49686 430 aaKnown RBP8.48□□□□□ -1.05
SEC61YLR378C TOS2P50078 622 aa8.48□□□□□ -1.05
SEC61YLR378C SNP1Q00916 300 aaPredicted RBP8.48□□□□□ -1.05
SEC61YLR378C YDR541CQ03049 344 aa8.48□□□□□ -1.05
SEC61YLR378C MGR3Q04472 501 aa8.48□□□□□ -1.05
SEC61YLR378C VID22Q05934 901 aa8.48□□□□□ -1.05
SEC61YLR378C EMG1Q06287 252 aaKnown RBP8.48□□□□□ -1.05
SEC61YLR378C ARV1Q06541 321 aa8.48□□□□□ -1.05
SEC61YLR378C YPR174CQ06616 221 aaPredicted RBP8.48□□□□□ -1.05
SEC61YLR378C MDM36Q06820 579 aa8.48□□□□□ -1.05
SEC61YLR378C YDL114WQ07530 308 aa8.48□□□□□ -1.05
SEC61YLR378C UIP4Q08926 304 aa8.48□□□□□ -1.05
SEC61YLR378C TPO4Q12256 659 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms