RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C PAC11P40960 533 aa2.13□□□□□ -2.07
AFB1YLR040C CIN2P46670 268 aa2.13□□□□□ -2.07
AFB1YLR040C PIN3Q06449 215 aa2.13□□□□□ -2.07
AFB1YLR040C NOP6Q07623 225 aaKnown RBP2.13□□□□□ -2.07
AFB1YLR040C IES4Q08561 116 aa2.13□□□□□ -2.07
AFB1YLR040C RPN5Q12250 445 aaKnown RBP2.13□□□□□ -2.07
AFB1YLR040C RPS18AP0CX55 146 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C RPS18BP0CX56 146 aaPredicted RBP2.12□□□□□ -2.07
AFB1YLR040C RNA1P11745 407 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C CMK2P22517 447 aa2.12□□□□□ -2.07
AFB1YLR040C PFF1P38244 976 aa2.12□□□□□ -2.07
AFB1YLR040C MNL1P38888 796 aa2.12□□□□□ -2.07
AFB1YLR040C ATP22P50273 684 aaPredicted RBP2.12□□□□□ -2.07
AFB1YLR040C YML6P51998 286 aa2.12□□□□□ -2.07
AFB1YLR040C RTT102P53330 157 aa2.12□□□□□ -2.07
AFB1YLR040C REX2P54964 269 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C RPL21AQ02753 160 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C ENT5Q03769 411 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C GAT3Q07928 141 aa2.12□□□□□ -2.07
AFB1YLR040C LDS2Q08218 356 aa2.12□□□□□ -2.07
AFB1YLR040C PCL9Q12477 304 aa2.12□□□□□ -2.07
AFB1YLR040C RPL21BQ12672 160 aaKnown RBP2.12□□□□□ -2.07
AFB1YLR040C MSP1P28737 362 aa2.11□□□□□ -2.07
AFB1YLR040C ZUO1P32527 433 aaKnown RBP2.11□□□□□ -2.07
AFB1YLR040C PDC2P32896 925 aa2.11□□□□□ -2.07
AFB1YLR040C SPP381P38282 291 aaPredicted RBP2.11□□□□□ -2.07
AFB1YLR040C SEC9P40357 651 aa2.11□□□□□ -2.07
AFB1YLR040C LCB2P40970 561 aa2.11□□□□□ -2.07
AFB1YLR040C AIP1P46680 615 aaKnown RBP2.11□□□□□ -2.07
AFB1YLR040C CTK3P46963 296 aaPredicted RBP2.11□□□□□ -2.07
AFB1YLR040C YIP5P53108 310 aa2.11□□□□□ -2.07
AFB1YLR040C FLC3P53121 802 aa2.11□□□□□ -2.07
AFB1YLR040C KTR6P54070 446 aa2.11□□□□□ -2.07
AFB1YLR040C CIK1Q01649 594 aa2.11□□□□□ -2.07
AFB1YLR040C YDR541CQ03049 344 aa2.11□□□□□ -2.07
AFB1YLR040C MSC3Q05812 728 aa2.11□□□□□ -2.07
AFB1YLR040C YLR177WQ06251 628 aa2.11□□□□□ -2.07
AFB1YLR040C MCH1Q07376 486 aa2.11□□□□□ -2.07
AFB1YLR040C YOR376WQ08900 122 aa2.11□□□□□ -2.07
AFB1YLR040C WSC4P38739 605 aa2.1□□□□□ -2.07
AFB1YLR040C MLH1P38920 769 aa2.1□□□□□ -2.07
AFB1YLR040C SEC27P41811 889 aaKnown RBP2.1□□□□□ -2.07
AFB1YLR040C VHT1P53241 593 aa2.1□□□□□ -2.07
AFB1YLR040C VAC7P53950 1165 aa2.1□□□□□ -2.07
AFB1YLR040C PRP38Q00723 242 aaPredicted RBP2.1□□□□□ -2.07
AFB1YLR040C MEX67Q99257 599 aaKnown RBP2.1□□□□□ -2.07
AFB1YLR040C STE7P06784 515 aa2.09□□□□□ -2.07
AFB1YLR040C MNE1P24720 663 aa2.09□□□□□ -2.07
AFB1YLR040C ANP1P32629 500 aa2.09□□□□□ -2.07
AFB1YLR040C LSM12P38828 187 aaKnown RBP2.09□□□□□ -2.07
AFB1YLR040C WSS1P38838 269 aa2.09□□□□□ -2.07
AFB1YLR040C TRF5P48561 642 aaKnown RBP2.09□□□□□ -2.07
AFB1YLR040C ERO1Q03103 563 aa2.09□□□□□ -2.07
AFB1YLR040C YDR115WQ04598 105 aa2.09□□□□□ -2.07
AFB1YLR040C IPK1Q06667 281 aa2.09□□□□□ -2.07
AFB1YLR040C RAX2Q12465 1220 aa2.09□□□□□ -2.07
AFB1YLR040C PUT4P15380 627 aa2.08□□□□□ -2.08
AFB1YLR040C DPH2P32461 534 aa2.08□□□□□ -2.08
AFB1YLR040C SOL2P37262 315 aa2.08□□□□□ -2.08
AFB1YLR040C DTR1P38125 572 aa2.08□□□□□ -2.08
AFB1YLR040C SMP1P38128 452 aa2.08□□□□□ -2.08
AFB1YLR040C KAP104P38217 918 aaKnown RBP2.08□□□□□ -2.08
AFB1YLR040C ASN2P49090 572 aaKnown RBP2.08□□□□□ -2.08
AFB1YLR040C AAD15Q08361 143 aa2.08□□□□□ -2.08
AFB1YLR040C TIR4Q12218 487 aaPredicted RBP2.08□□□□□ -2.08
AFB1YLR040C TPI1P00942 248 aaKnown RBP2.07□□□□□ -2.08
AFB1YLR040C HEM4P06174 275 aa2.07□□□□□ -2.08
AFB1YLR040C MAS2P11914 482 aa2.07□□□□□ -2.08
AFB1YLR040C TOA1P32773 286 aa2.07□□□□□ -2.08
AFB1YLR040C PXA2P34230 853 aa2.07□□□□□ -2.08
AFB1YLR040C SLX1P38324 304 aa2.07□□□□□ -2.08
AFB1YLR040C LRP1P38801 184 aaKnown RBP2.07□□□□□ -2.08
AFB1YLR040C CHL4P38907 458 aa2.07□□□□□ -2.08
AFB1YLR040C PEX22P39718 180 aa2.07□□□□□ -2.08
AFB1YLR040C YFL012WP43580 148 aa2.07□□□□□ -2.08
AFB1YLR040C ATP16Q12165 160 aa2.07□□□□□ -2.08
AFB1YLR040C SFM1Q12314 213 aa2.07□□□□□ -2.08
AFB1YLR040C PAR32Q12515 295 aaKnown RBP2.07□□□□□ -2.08
AFB1YLR040C YOR338WQ99326 363 aa2.07□□□□□ -2.08
AFB1YLR040C RRP7P25368 297 aaPredicted RBP2.06□□□□□ -2.08
AFB1YLR040C FMT1P32785 401 aa2.06□□□□□ -2.08
AFB1YLR040C BMT2P38278 337 aa2.06□□□□□ -2.08
AFB1YLR040C YER184CP39961 794 aa2.06□□□□□ -2.08
AFB1YLR040C RSC1P53236 928 aa2.06□□□□□ -2.08
AFB1YLR040C FSH2Q05015 223 aa2.06□□□□□ -2.08
AFB1YLR040C YLH47Q06493 454 aa2.06□□□□□ -2.08
AFB1YLR040C YOL085CQ99345 113 aa2.06□□□□□ -2.08
AFB1YLR040C RPL23AP0CX41 137 aaKnown RBP2.05□□□□□ -2.08
AFB1YLR040C RPL23BP0CX42 137 aaKnown RBP2.05□□□□□ -2.08
AFB1YLR040C UNG1P12887 359 aa2.05□□□□□ -2.08
AFB1YLR040C PMT2P31382 759 aa2.05□□□□□ -2.08
AFB1YLR040C FHL1P39521 936 aa2.05□□□□□ -2.08
AFB1YLR040C YJL055WP47044 245 aa2.05□□□□□ -2.08
AFB1YLR040C VEL1P53058 206 aa2.05□□□□□ -2.08
AFB1YLR040C YGR067CP53243 804 aa2.05□□□□□ -2.08
AFB1YLR040C VPS9P54787 451 aa2.05□□□□□ -2.08
AFB1YLR040C YDL109CQ12103 647 aa2.05□□□□□ -2.08
AFB1YLR040C HMS1Q12398 434 aa2.05□□□□□ -2.08
AFB1YLR040C RPS14AP06367 137 aaKnown RBP2.04□□□□□ -2.08
AFB1YLR040C RPL16AP26784 199 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms