RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	LAS21	P40367	830 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	GZF3	P42944	551 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	RPA34	P47006	233 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	MAK3	Q03503	176 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	HOF1	Q05080	669 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	OPT2	Q06593	877 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	SYT1	Q06836	1226 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	TPO1	Q07824	586 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	PML1	Q07930	204 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	TCO89	Q08921	799 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	HFI1	Q12060	488 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YLR046C	Q12253	270 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YOL114C	Q12322	202 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YPR014C	Q6B0W2	109 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	PNO1	Q99216	274 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	AAT2	P23542	418 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	CDC20	P26309	610 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	BUB3	P26449	341 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	URA7	P28274	579 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	LAC1	P28496	418 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
GRC3	YLL035W	AEP1	P32493	518 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	TCA17	P32613	152 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	RMA1	P36001	430 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	EXO5	P38289	585 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	ARN1	P38731	627 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	SUR2	P38992	349 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YEL068C	P39977	110 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	ATM1	P40416	690 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YIL108W	P40483	696 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	ARF3	P40994	183 aa	RIP-Chip data	4.22	□□□□□ -1.73	RIP-Chip
GRC3	YLL035W	RMD8	P43620	662 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	MRX5	P47007	382 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YJL045W	P47052	634 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YDL183C	P48569	320 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	AMA1	P50082	593 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	NCS6	P53088	359 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	NSA1	P53136	463 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	YGR012W	P53206	393 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	YGR168C	P53293	376 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	CUS2	P53830	285 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	SLM2	P53955	656 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	KTR6	P54070	446 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	MOT3	P54785	490 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	GPD1	Q00055	391 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	TRS31	Q03337	283 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	HDA2	Q06629	674 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	KEL3	Q08979	651 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	YGK3	Q12222	375 aa	Predicted RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	YOP1	Q12402	180 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	ERG27	Q12452	347 aa	Known RBP	4.22	□□□□□ -1.73
GRC3	YLL035W	YOL159C-A	Q3E769	90 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	MHF1	Q3E835	90 aa		4.22	□□□□□ -1.73
GRC3	YLL035W	PRE1	P22141	198 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	ERG9	P29704	444 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	YKR051W	P36142	418 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	YHR054C	P38780	354 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	SHU2	P38957	223 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	FAU1	P40099	211 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	RPL10	P41805	221 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	GLR1	P41921	483 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	AAD10	P47182	288 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	SLX9	P53251	210 aa	Predicted RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	BUD32	P53323	261 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	RPT4	P53549	437 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	RHO3	Q00245	231 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	YMR155W	Q03795	547 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	YHC1	Q05900	231 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	YPR147C	Q06522	304 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	YPL066W	Q12194	479 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	LCB4	Q12246	624 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	RTN2	Q12443	393 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	EFG1	Q3E705	233 aa	Known RBP	4.21	□□□□□ -1.74
GRC3	YLL035W	RGS2	Q99188	309 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	Q0144	Q9ZZW2	109 aa		4.21	□□□□□ -1.74
GRC3	YLL035W	CYC1	P00044	109 aa	Predicted RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	SPS2	P08459	502 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	RPL31A	P0C2H8	113 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	YER152C	P10356	443 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	CKS1	P20486	150 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	RNR1	P21524	888 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	IDP1	P21954	428 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	MNE1	P24720	663 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	GRR1	P24814	1151 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	RNA14	P25298	677 aa	Known RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	RRP7	P25368	297 aa	Predicted RBP	4.2	□□□□□ -1.74
GRC3	YLL035W	DCC1	P25559	380 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	AHC2	P25649	128 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	MSN4	P33749	630 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	SRY1	P36007	326 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	YKL162C	P36052	402 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	YBR284W	P38150	797 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	PHO89	P38361	574 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	PPE1	P38796	400 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	SPL2	P38839	148 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	RBG1	P39729	369 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	PKP2	P53170	491 aa		4.2	□□□□□ -1.74
GRC3	YLL035W	SHY1	P53266	389 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 109.7 ms