RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C SNF8Q12483 233 aa3.82□□□□□ -1.8
SRP40YKR092C RSF2P46974 1380 aa3.81□□□□□ -1.8
SRP40YKR092C CDC8P00572 216 aa3.81□□□□□ -1.8
SRP40YKR092C SCEIP03882 235 aa3.81□□□□□ -1.8
SRP40YKR092C LEU4P06208 619 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C SPT3P06844 337 aa3.81□□□□□ -1.8
SRP40YKR092C MET2P08465 486 aa3.81□□□□□ -1.8
SRP40YKR092C CDC24P11433 854 aaPredicted RBP3.81□□□□□ -1.8
SRP40YKR092C APE1P14904 514 aa3.81□□□□□ -1.8
SRP40YKR092C NSP1P14907 823 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C SRV2P17555 526 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C NUP1P20676 1076 aa3.81□□□□□ -1.8
SRP40YKR092C RAD14P28519 371 aa3.81□□□□□ -1.8
SRP40YKR092C CAM1P29547 415 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C MNS1P32906 549 aa3.81□□□□□ -1.8
SRP40YKR092C YOX1P34161 385 aa3.81□□□□□ -1.8
SRP40YKR092C AST1P35183 429 aa3.81□□□□□ -1.8
SRP40YKR092C ICS2P38284 255 aa3.81□□□□□ -1.8
SRP40YKR092C YBP1P38315 674 aa3.81□□□□□ -1.8
SRP40YKR092C VBA2P38358 474 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C SMF1P38925 575 aa3.81□□□□□ -1.8
SRP40YKR092C RMD6P39975 231 aa3.81□□□□□ -1.8
SRP40YKR092C ECM10P39987 644 aa3.81□□□□□ -1.8
SRP40YKR092C YER010CP40011 234 aa3.81□□□□□ -1.8
SRP40YKR092C RGI2P40188 164 aa3.81□□□□□ -1.8
SRP40YKR092C EFM4P40516 257 aa3.81□□□□□ -1.8
SRP40YKR092C VMA13P41807 478 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C AGP3P43548 558 aa3.81□□□□□ -1.8
SRP40YKR092C MIC19P43594 170 aa3.81□□□□□ -1.8
SRP40YKR092C MRX6P48564 524 aa3.81□□□□□ -1.8
SRP40YKR092C ALT2P52892 507 aa3.81□□□□□ -1.8
SRP40YKR092C YGR066CP53242 292 aa3.81□□□□□ -1.8
SRP40YKR092C YGR117CP53270 476 aa3.81□□□□□ -1.8
SRP40YKR092C RPT4P53549 437 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C ATP23P53722 227 aa3.81□□□□□ -1.8
SRP40YKR092C YNL134CP53912 376 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C MRP51Q02950 344 aa3.81□□□□□ -1.8
SRP40YKR092C STE23Q06010 1027 aa3.81□□□□□ -1.8
SRP40YKR092C SFH1Q06168 426 aa3.81□□□□□ -1.8
SRP40YKR092C YEH1Q07804 573 aa3.81□□□□□ -1.8
SRP40YKR092C NSL1Q12143 216 aa3.81□□□□□ -1.8
SRP40YKR092C GET3Q12154 354 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C RDL1Q12305 139 aaKnown RBP3.81□□□□□ -1.8
SRP40YKR092C RPN6Q12377 434 aa3.81□□□□□ -1.8
SRP40YKR092C EMP46Q12396 444 aa3.81□□□□□ -1.8
SRP40YKR092C MRPL23Q12487 163 aaPredicted RBP3.81□□□□□ -1.8
SRP40YKR092C COX1P00401 534 aa3.8□□□□□ -1.8
SRP40YKR092C ATP6P00854 259 aa3.8□□□□□ -1.8
SRP40YKR092C ILV2P07342 687 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C MAS1P10507 462 aa3.8□□□□□ -1.8
SRP40YKR092C NHP6BP11633 99 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C MAS2P11914 482 aa3.8□□□□□ -1.8
SRP40YKR092C KRS1P15180 591 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C COQ1P18900 473 aa3.8□□□□□ -1.8
SRP40YKR092C IDH2P28241 369 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C FAA1P30624 700 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C PRP21P32524 280 aaPredicted RBP3.8□□□□□ -1.8
SRP40YKR092C SUI1P32911 108 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C YET1P35723 206 aa3.8□□□□□ -1.8
SRP40YKR092C KES1P35844 434 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C STB6P36085 766 aa3.8□□□□□ -1.8
SRP40YKR092C YKL070WP36087 169 aa3.8□□□□□ -1.8
SRP40YKR092C ANR2P36090 516 aaPredicted RBP3.8□□□□□ -1.8
SRP40YKR092C GRE3P38715 327 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SRP40YKR092C YHR045WP38775 560 aa3.8□□□□□ -1.8
SRP40YKR092C SPC97P38863 823 aa3.8□□□□□ -1.8
SRP40YKR092C AFG3P39925 761 aa3.8□□□□□ -1.8
SRP40YKR092C YAT2P40017 923 aa3.8□□□□□ -1.8
SRP40YKR092C PAC11P40960 533 aa3.8□□□□□ -1.8
SRP40YKR092C YFR018CP43599 363 aa3.8□□□□□ -1.8
SRP40YKR092C IRC7P43623 340 aa3.8□□□□□ -1.8
SRP40YKR092C TRS85P46944 698 aa3.8□□□□□ -1.8
SRP40YKR092C YJL132WP47014 750 aa3.8□□□□□ -1.8
SRP40YKR092C UBX6P47049 396 aa3.8□□□□□ -1.8
SRP40YKR092C YJR079WP47126 109 aa3.8□□□□□ -1.8
SRP40YKR092C PSP1P50896 841 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C YGL159WP53110 370 aa3.8□□□□□ -1.8
SRP40YKR092C DUO1P53168 247 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C GET1P53192 235 aa3.8□□□□□ -1.8
SRP40YKR092C YGR079WP53249 370 aa3.8□□□□□ -1.8
SRP40YKR092C IMP4P53941 290 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C YAT1P80235 687 aa3.8□□□□□ -1.8
SRP40YKR092C EBS1Q03466 884 aaKnown RBP3.8□□□□□ -1.8
SRP40YKR092C CSN9Q03981 162 aa3.8□□□□□ -1.8
SRP40YKR092C ROY1Q04847 553 aa3.8□□□□□ -1.8
SRP40YKR092C YDR222WQ04925 415 aa3.8□□□□□ -1.8
SRP40YKR092C CDC123Q05791 360 aa3.8□□□□□ -1.8
SRP40YKR092C MFG1Q07684 458 aa3.8□□□□□ -1.8
SRP40YKR092C RDR1Q08904 546 aa3.8□□□□□ -1.8
SRP40YKR092C UIP4Q08926 304 aa3.8□□□□□ -1.8
SRP40YKR092C YOR214CQ12282 236 aa3.8□□□□□ -1.8
SRP40YKR092C COX17Q12287 69 aa3.8□□□□□ -1.8
SRP40YKR092C GPM3Q12326 303 aa3.8□□□□□ -1.8
SRP40YKR092C YDR262WQ12331 272 aa3.8□□□□□ -1.8
SRP40YKR092C DCN1Q12395 269 aa3.8□□□□□ -1.8
SRP40YKR092C SEC53P07283 254 aaKnown RBP3.79□□□□□ -1.8
SRP40YKR092C COS2P0CX12 379 aa3.79□□□□□ -1.8
SRP40YKR092C COS3P0CX13 379 aa3.79□□□□□ -1.8
SRP40YKR092C RPL1AP0CX43 217 aaKnown RBP3.79□□□□□ -1.8
SRP40YKR092C RPL1BP0CX44 217 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms