RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeastyeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOS1YKL205W PEX12Q04370 399 aa3.6□□□□□ -1.83
LOS1YKL205W NOP12Q08208 459 aaKnown RBP3.6□□□□□ -1.83
LOS1YKL205W GLE1Q12315 538 aa3.6□□□□□ -1.83
LOS1YKL205W FRE7Q12333 620 aa3.6□□□□□ -1.83
LOS1YKL205W FAB1P34756 2278 aa3.59□□□□□ -1.83
LOS1YKL205W CDC36P06100 191 aaPredicted RBP3.59□□□□□ -1.83
LOS1YKL205W SPT15P13393 240 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W KGD1P20967 1014 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W DCG1P32460 244 aa3.59□□□□□ -1.83
LOS1YKL205W PRP21P32524 280 aaPredicted RBP3.59□□□□□ -1.83
LOS1YKL205W PTR2P32901 601 aa3.59□□□□□ -1.83
LOS1YKL205W YPT7P32939 208 aa3.59□□□□□ -1.83
LOS1YKL205W LHS1P36016 881 aa3.59□□□□□ -1.83
LOS1YKL205W YKL071WP36086 256 aa3.59□□□□□ -1.83
LOS1YKL205W PDX3P38075 228 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W GDT1P38301 280 aaPredicted RBP3.59□□□□□ -1.83
LOS1YKL205W FET3P38993 636 aa3.59□□□□□ -1.83
LOS1YKL205W KRE29P40026 464 aa3.59□□□□□ -1.83
LOS1YKL205W MRPL19P53875 158 aa3.59□□□□□ -1.83
LOS1YKL205W YDR541CQ03049 344 aa3.59□□□□□ -1.83
LOS1YKL205W ERB1Q04660 807 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W DCR2Q05924 578 aa3.59□□□□□ -1.83
LOS1YKL205W ATG17Q06410 417 aa3.59□□□□□ -1.83
LOS1YKL205W GIC2Q06648 383 aa3.59□□□□□ -1.83
LOS1YKL205W RTK1Q12100 620 aaPredicted RBP3.59□□□□□ -1.83
LOS1YKL205W ACF2Q12168 779 aa3.59□□□□□ -1.83
LOS1YKL205W RHO1P06780 209 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W MER1P16523 270 aa3.59□□□□□ -1.83
LOS1YKL205W MGE1P38523 228 aa3.59□□□□□ -1.83
LOS1YKL205W NAB3P38996 802 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
LOS1YKL205W BAT2P47176 376 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W MRK1P50873 501 aa3.59□□□□□ -1.83
LOS1YKL205W HOL1P53389 586 aa3.59□□□□□ -1.83
LOS1YKL205W ARE2P53629 642 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W YAT1P80235 687 aa3.59□□□□□ -1.83
LOS1YKL205W TMA20P89886 181 aaPredicted RBP3.59□□□□□ -1.83
LOS1YKL205W ELP4Q02884 456 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W PEX25Q02969 394 aa3.59□□□□□ -1.83
LOS1YKL205W NIP7Q08962 181 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W RPN5Q12250 445 aaKnown RBP3.59□□□□□ -1.83
LOS1YKL205W HER1Q12276 1246 aa3.59□□□□□ -1.83
LOS1YKL205W YPR064WQ12492 139 aa3.59□□□□□ -1.83
LOS1YKL205W SFG1Q12507 346 aa3.59□□□□□ -1.83
LOS1YKL205W ZWF1P11412 505 aaKnown RBP3.59□□□□□ -1.84
LOS1YKL205W STE4P18851 423 aa3.59□□□□□ -1.84
LOS1YKL205W PHO80P20052 293 aa3.59□□□□□ -1.84
LOS1YKL205W RHB1P25378 209 aa3.59□□□□□ -1.84
LOS1YKL205W THI4P32318 326 aa3.59□□□□□ -1.84
LOS1YKL205W OAC1P32332 324 aa3.59□□□□□ -1.84
LOS1YKL205W RPS27AP35997 82 aaKnown RBP3.59□□□□□ -1.84
LOS1YKL205W CBP4P37267 147 aa3.59□□□□□ -1.84
LOS1YKL205W RPS27BP38711 82 aa3.59□□□□□ -1.84
LOS1YKL205W CEM1P39525 442 aa3.59□□□□□ -1.84
LOS1YKL205W FAU1P40099 211 aa3.59□□□□□ -1.84
LOS1YKL205W EMC2P47133 292 aaKnown RBP3.59□□□□□ -1.84
LOS1YKL205W SLD3P53135 668 aa3.59□□□□□ -1.84
LOS1YKL205W ERP6P53198 216 aa3.59□□□□□ -1.84
LOS1YKL205W YLR460CP54007 376 aa3.59□□□□□ -1.84
LOS1YKL205W ASI1P54074 624 aa3.59□□□□□ -1.84
LOS1YKL205W YDR391CQ04170 232 aa3.59□□□□□ -1.84
LOS1YKL205W YLR345WQ06137 509 aa3.59□□□□□ -1.84
LOS1YKL205W TPO4Q12256 659 aa3.59□□□□□ -1.84
LOS1YKL205W HXT2P23585 541 aa3.58□□□□□ -1.84
LOS1YKL205W MBA1P38300 278 aa3.58□□□□□ -1.84
LOS1YKL205W PZF1P39933 429 aa3.58□□□□□ -1.84
LOS1YKL205W TED1P40533 473 aa3.58□□□□□ -1.84
LOS1YKL205W YJL218WP40892 196 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W SOK2P53438 785 aaPredicted RBP3.58□□□□□ -1.84
LOS1YKL205W SMP3Q04174 516 aa3.58□□□□□ -1.84
LOS1YKL205W APC4Q04601 652 aa3.58□□□□□ -1.84
LOS1YKL205W ELP6Q04868 273 aa3.58□□□□□ -1.84
LOS1YKL205W RSA3Q05942 220 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W BUR2Q05949 395 aa3.58□□□□□ -1.84
LOS1YKL205W LUC7Q07508 261 aaPredicted RBP3.58□□□□□ -1.84
LOS1YKL205W PUS7Q08647 676 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W RAX1Q08760 435 aa3.58□□□□□ -1.84
LOS1YKL205W MMT2Q08970 484 aa3.58□□□□□ -1.84
LOS1YKL205W RTC5Q12108 567 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W HAA1Q12753 694 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W ADF1Q2V2Q1 113 aa3.58□□□□□ -1.84
LOS1YKL205W MHF1Q3E835 90 aa3.58□□□□□ -1.84
LOS1YKL205W ERD1P16151 362 aa3.58□□□□□ -1.84
LOS1YKL205W YAP1P19880 650 aaKnown RBP3.58□□□□□ -1.84
LOS1YKL205W PEX3P28795 441 aa3.58□□□□□ -1.84
LOS1YKL205W ITR2P30606 609 aa3.58□□□□□ -1.84
LOS1YKL205W PEX6P33760 1030 aa3.58□□□□□ -1.84
LOS1YKL205W YPK3P38070 525 aa3.58□□□□□ -1.84
LOS1YKL205W YAR028WP39548 234 aa3.58□□□□□ -1.84
LOS1YKL205W PRM8P53174 237 aa3.58□□□□□ -1.84
LOS1YKL205W PFA5Q03289 374 aa3.58□□□□□ -1.84
LOS1YKL205W YPR097WQ06839 1073 aa3.58□□□□□ -1.84
LOS1YKL205W GDH2P33327 1092 aaKnown RBP3.57□□□□□ -1.84
LOS1YKL205W LHP1P33399 275 aaKnown RBP3.57□□□□□ -1.84
LOS1YKL205W GPX1P36014 167 aa3.57□□□□□ -1.84
LOS1YKL205W GDI1P39958 451 aaKnown RBP3.57□□□□□ -1.84
LOS1YKL205W STB1P42845 420 aa3.57□□□□□ -1.84
LOS1YKL205W JHD2P47156 728 aaPredicted RBP3.57□□□□□ -1.84
LOS1YKL205W COS10P52924 374 aa3.57□□□□□ -1.84
LOS1YKL205W YGR168CP53293 376 aa3.57□□□□□ -1.84
LOS1YKL205W CSL4P53859 292 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms