RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	TRM112	P53738	135 aa	Predicted RBP	0.89	□□□□□ -2.27
RPL39	YJL189W	RNH201	P53942	307 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	RGM1	Q00453	211 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	DCS1	Q06151	350 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	YOL029C	Q08187	201 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	SFM1	Q12314	213 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	YOR338W	Q99326	363 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	ARO3	P14843	370 aa	Known RBP	0.88	□□□□□ -2.27
RPL39	YJL189W	BRF1	P29056	596 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	SPS19	P32573	292 aa	Known RBP	0.88	□□□□□ -2.27
RPL39	YJL189W	TIR2	P33890	251 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	PIB2	P53191	635 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	CDH1	P53197	566 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	RTS3	P53289	263 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	YMR130W	Q04223	302 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	LDS2	Q08218	356 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	ISN1	Q99312	450 aa		0.88	□□□□□ -2.27
RPL39	YJL189W	BEM2	P39960	2167 aa	Known RBP	0.88	□□□□□ -2.27
RPL39	YJL189W	SAG1	P20840	650 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	COX10	P21592	462 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	ALK2	P32789	676 aa	Predicted RBP	0.87	□□□□□ -2.27
RPL39	YJL189W	TKL2	P33315	681 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	MCR1	P36060	302 aa	Known RBP	0.87	□□□□□ -2.27
RPL39	YJL189W	BDH1	P39714	382 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	RRN9	P53437	365 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	FSH2	Q05015	223 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	ATP16	Q12165	160 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	LDB17	Q12342	491 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	RTN2	Q12443	393 aa		0.87	□□□□□ -2.27
RPL39	YJL189W	OPI3	P05375	206 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	UNG1	P12887	359 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	IMP2'	P32351	346 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	CAK1	P43568	368 aa	Predicted RBP	0.86	□□□□□ -2.27
RPL39	YJL189W	ASN2	P49090	572 aa	Known RBP	0.86	□□□□□ -2.27
RPL39	YJL189W	YGR015C	P53208	328 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	NRM1	P53718	249 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	ACL4	Q03771	387 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	HMS1	Q12398	434 aa		0.86	□□□□□ -2.27
RPL39	YJL189W	RPS14A	P06367	137 aa	Known RBP	0.85	□□□□□ -2.27
RPL39	YJL189W	CLC1	P17891	233 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	SNF6	P18888	332 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	CLB3	P24870	427 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	YBL081W	P38180	368 aa	Known RBP	0.85	□□□□□ -2.27
RPL39	YJL189W	SHE1	P38200	338 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	RPS14B	P39516	138 aa	Known RBP	0.85	□□□□□ -2.27
RPL39	YJL189W	YJR054W	P47114	497 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	STE24	P47154	453 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	API2	Q04413	109 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	YOP1	Q12402	180 aa		0.85	□□□□□ -2.27
RPL39	YJL189W	CDC21	P06785	304 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	MIG1	P27705	504 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	SKT5	P34226	696 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	ASC1	P38011	319 aa	Known RBP	0.84	□□□□□ -2.27
RPL39	YJL189W	SHE3	P38272	425 aa	Known RBP	0.84	□□□□□ -2.27
RPL39	YJL189W	YMR262W	P38430	313 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	UTP9	P38882	575 aa	Known RBP	0.84	□□□□□ -2.27
RPL39	YJL189W	UFE1	P41834	346 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	IRC6	P43615	237 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	RPN9	Q04062	393 aa	Known RBP	0.84	□□□□□ -2.27
RPL39	YJL189W	MED1	Q12321	566 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	HIF1	Q12373	385 aa		0.84	□□□□□ -2.27
RPL39	YJL189W	TPK3	P05986	398 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	CKA2	P19454	339 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	LDS1	P31379	325 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	ATG12	P38316	186 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	ATM1	P40416	690 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	PMT5	P52867	743 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	NBP1	P52919	319 aa	Predicted RBP	0.83	□□□□□ -2.28
RPL39	YJL189W	YGL088W	P53151	121 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	PRP42	Q03776	544 aa	Known RBP	0.83	□□□□□ -2.28
RPL39	YJL189W	ROY1	Q04847	553 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	DON1	Q05610	365 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	MMR1	Q06324	491 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	FRE8	Q12209	686 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	YRF1-4	O13559	1382 aa		0.83	□□□□□ -2.28
RPL39	YJL189W	STE2	D6VTK4	431 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	CPT1	P17898	393 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	PMT2	P31382	759 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	ERG3	P32353	365 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	COS9	P36034	407 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	INM1	P38710	295 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	MED6	P38782	295 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	SER3	P40054	469 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	VHS2	P40463	436 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	MRPL19	P53875	158 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	RNH203	Q12338	110 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	MTR10	Q99189	972 aa		0.82	□□□□□ -2.28
RPL39	YJL189W	RAD23	P32628	398 aa	Known RBP	0.81	□□□□□ -2.28
RPL39	YJL189W	STN1	P38960	494 aa		0.81	□□□□□ -2.28
RPL39	YJL189W	SED5	Q01590	340 aa		0.81	□□□□□ -2.28
RPL39	YJL189W	YMR010W	Q03687	405 aa		0.81	□□□□□ -2.28
RPL39	YJL189W	CLP1	Q08685	445 aa	Predicted RBP	0.81	□□□□□ -2.28
RPL39	YJL189W	PGA3	Q12746	312 aa	Known RBP	0.81	□□□□□ -2.28
RPL39	YJL189W	HEM4	P06174	275 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	RED1	P14291	827 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	TOA2	P32774	122 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	ECM14	P38836	430 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	GGC1	P38988	300 aa		0.8	□□□□□ -2.28
RPL39	YJL189W	GPD2	P41911	440 aa	Known RBP	0.8	□□□□□ -2.28
RPL39	YJL189W	RPT4	P53549	437 aa	Known RBP	0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms