RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	YGR117C	P53270	476 aa		0.45	□□□□□ -2.34
APQ12	YIL040W	TRM112	P53738	135 aa	Predicted RBP	0.45	□□□□□ -2.34
APQ12	YIL040W	MRX11	Q03079	207 aa		0.45	□□□□□ -2.34
APQ12	YIL040W	APC4	Q04601	652 aa		0.45	□□□□□ -2.34
APQ12	YIL040W	COS7	Q07788	383 aa		0.45	□□□□□ -2.34
APQ12	YIL040W	RLP24	Q07915	199 aa	Known RBP	0.45	□□□□□ -2.34
APQ12	YIL040W	CLP1	Q08685	445 aa	Predicted RBP	0.45	□□□□□ -2.34
APQ12	YIL040W	FLO11	P08640	1367 aa		0.45	□□□□□ -2.34
APQ12	YIL040W	ADE4	P04046	510 aa	Known RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	ALG1	P16661	449 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	URA4	P20051	364 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	CHA1	P25379	360 aa	Known RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	BRF1	P29056	596 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	ANP1	P32629	500 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	NTC20	P38302	140 aa	Predicted RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	HEM14	P40012	539 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	BUD13	P46947	266 aa	Predicted RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	YGR015C	P53208	328 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	PRM1	P53835	661 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	RPA49	Q01080	415 aa	Predicted RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	SPR6	Q01684	191 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	SMD1	Q02260	146 aa	Predicted RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	YMR010W	Q03687	405 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	GMC1	Q04399	608 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	API2	Q04413	109 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	FSH2	Q05015	223 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	DIS3	Q08162	1001 aa	Known RBP	0.44	□□□□□ -2.34
APQ12	YIL040W	YDL211C	Q12121	372 aa		0.44	□□□□□ -2.34
APQ12	YIL040W	SRV2	P17555	526 aa	Known RBP	0.43	□□□□□ -2.34
APQ12	YIL040W	HPR1	P17629	752 aa	Known RBP	0.43	□□□□□ -2.34
APQ12	YIL040W	CPT1	P17898	393 aa		0.43	□□□□□ -2.34
APQ12	YIL040W	COS9	P36034	407 aa		0.43	□□□□□ -2.34
APQ12	YIL040W	FUI1	P38196	639 aa		0.43	□□□□□ -2.34
APQ12	YIL040W	NAS6	P50086	228 aa		0.43	□□□□□ -2.34
APQ12	YIL040W	YDR131C	Q03899	556 aa		0.43	□□□□□ -2.34
APQ12	YIL040W	MEX67	Q99257	599 aa	Known RBP	0.43	□□□□□ -2.34
APQ12	YIL040W	TDH2	P00358	332 aa	Known RBP	0.42	□□□□□ -2.34
APQ12	YIL040W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
APQ12	YIL040W	MET2	P08465	486 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	COX10	P21592	462 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	MCR1	P36060	302 aa	Known RBP	0.42	□□□□□ -2.34
APQ12	YIL040W	GPX2	P38143	162 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	YMR262W	P38430	313 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	GEP4	P38812	185 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	GPI16	P38875	610 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	UTP9	P38882	575 aa	Known RBP	0.42	□□□□□ -2.34
APQ12	YIL040W	SMF1	P38925	575 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	GGC1	P38988	300 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	MMF1	P40185	145 aa	Known RBP	0.42	□□□□□ -2.34
APQ12	YIL040W	YGL138C	P53122	345 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	CWC22	P53333	577 aa	Known RBP	0.42	□□□□□ -2.34
APQ12	YIL040W	KAP120	Q02932	1032 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	CSI1	Q04368	295 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	YOL029C	Q08187	201 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	VPS54	Q12071	889 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	ATP16	Q12165	160 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	GRX6	Q12438	231 aa		0.42	□□□□□ -2.34
APQ12	YIL040W	DST1	P07273	309 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	TIR2	P33890	251 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	TIP20	P33891	701 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	VID27	P40157	782 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	PCL7	P40186	285 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	CIN2	P46670	268 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	YJR054W	P47114	497 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	ROG1	P53118	685 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	SKO1	Q02100	647 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	RPN9	Q04062	393 aa	Known RBP	0.41	□□□□□ -2.34
APQ12	YIL040W	YDR114C	Q04597	100 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	PEX30	Q06169	523 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	YDR056C	Q12025	205 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	YOR283W	Q12040	230 aa	Known RBP	0.41	□□□□□ -2.34
APQ12	YIL040W	YPR063C	Q12160	140 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	RUP1	Q12242	671 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	PRP46	Q12417	451 aa	Predicted RBP	0.41	□□□□□ -2.34
APQ12	YIL040W	RTN2	Q12443	393 aa		0.41	□□□□□ -2.34
APQ12	YIL040W	ARG3	P05150	338 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	KRE1	P17260	313 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	DAL81	P21657	970 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	RSA4	P25382	515 aa	Known RBP	0.4	□□□□□ -2.35
APQ12	YIL040W	DPB3	P27344	201 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	ERG3	P32353	365 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	SMC2	P38989	1170 aa	Known RBP	0.4	□□□□□ -2.35
APQ12	YIL040W	YER079W	P40052	210 aa	Known RBP	0.4	□□□□□ -2.35
APQ12	YIL040W	ARF3	P40994	183 aa	RIP-Chip data	0.4	□□□□□ -2.35	not detected
APQ12	YIL040W	YPL080C	Q02826	108 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	YOP1	Q12402	180 aa		0.4	□□□□□ -2.35
APQ12	YIL040W	COX3	P00420	269 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	HEM4	P06174	275 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	MED8	P38304	223 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	MED6	P38782	295 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	STE24	P47154	453 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	CDH1	P53197	566 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	RRN9	P53437	365 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	OCA2	P53949	197 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	SLT2	Q00772	484 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	GTO3	Q04806	366 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	YDR222W	Q04925	415 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	DCS1	Q06151	350 aa		0.39	□□□□□ -2.35
APQ12	YIL040W	IMH1	Q06704	911 aa	Known RBP	0.39	□□□□□ -2.35
APQ12	YIL040W	MED2	Q12124	431 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms