RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C TRF5P48561 642 aaKnown RBP3.11□□□□□ -1.91
CUP1-2YHR055C REX2P54964 269 aaKnown RBP3.11□□□□□ -1.91
CUP1-2YHR055C TPS1Q00764 495 aaKnown RBP3.11□□□□□ -1.91
CUP1-2YHR055C RNY1Q02933 434 aaKnown RBP3.11□□□□□ -1.91
CUP1-2YHR055C RPL1AP0CX43 217 aaKnown RBP3.1□□□□□ -1.91
CUP1-2YHR055C RPL1BP0CX44 217 aaKnown RBP3.1□□□□□ -1.91
CUP1-2YHR055C SPO23P33757 523 aa3.1□□□□□ -1.91
CUP1-2YHR055C ALD5P40047 520 aaKnown RBP3.1□□□□□ -1.91
CUP1-2YHR055C ASN2P49090 572 aaKnown RBP3.1□□□□□ -1.91
CUP1-2YHR055C MEH1Q02205 184 aa3.1□□□□□ -1.91
CUP1-2YHR055C FAB1P34756 2278 aa3.1□□□□□ -1.91
CUP1-2YHR055C GIT1P25346 518 aa3.09□□□□□ -1.91
CUP1-2YHR055C SOL2P37262 315 aa3.09□□□□□ -1.91
CUP1-2YHR055C PFF1P38244 976 aa3.09□□□□□ -1.91
CUP1-2YHR055C EFM4P40516 257 aa3.09□□□□□ -1.91
CUP1-2YHR055C SEC27P41811 889 aaKnown RBP3.09□□□□□ -1.91
CUP1-2YHR055C YIP5P53108 310 aa3.09□□□□□ -1.91
CUP1-2YHR055C SRN2Q99176 213 aa3.09□□□□□ -1.91
CUP1-2YHR055C RPS18AP0CX55 146 aaKnown RBP3.08□□□□□ -1.92
CUP1-2YHR055C RPS18BP0CX56 146 aaPredicted RBP3.08□□□□□ -1.92
CUP1-2YHR055C RNA1P11745 407 aaKnown RBP3.08□□□□□ -1.92
CUP1-2YHR055C MNE1P24720 663 aa3.08□□□□□ -1.92
CUP1-2YHR055C BMT2P38278 337 aa3.08□□□□□ -1.92
CUP1-2YHR055C SEC9P40357 651 aa3.08□□□□□ -1.92
CUP1-2YHR055C CWC22P53333 577 aaKnown RBP3.08□□□□□ -1.92
CUP1-2YHR055C APJ1P53940 528 aa3.08□□□□□ -1.92
CUP1-2YHR055C ADH1P00330 348 aaKnown RBP3.07□□□□□ -1.92
CUP1-2YHR055C CMK2P22517 447 aa3.07□□□□□ -1.92
CUP1-2YHR055C DPH2P32461 534 aa3.07□□□□□ -1.92
CUP1-2YHR055C TOA2P32774 122 aa3.07□□□□□ -1.92
CUP1-2YHR055C WSC4P38739 605 aa3.07□□□□□ -1.92
CUP1-2YHR055C GDI1P39958 451 aaKnown RBP3.07□□□□□ -1.92
CUP1-2YHR055C FLC3P53121 802 aa3.07□□□□□ -1.92
CUP1-2YHR055C YPL107WQ02873 248 aa3.07□□□□□ -1.92
CUP1-2YHR055C ENT5Q03769 411 aaKnown RBP3.07□□□□□ -1.92
CUP1-2YHR055C MSC3Q05812 728 aa3.07□□□□□ -1.92
CUP1-2YHR055C IPK1Q06667 281 aa3.07□□□□□ -1.92
CUP1-2YHR055C PAR32Q12515 295 aaKnown RBP3.07□□□□□ -1.92
CUP1-2YHR055C MRPL8P22353 238 aa3.06□□□□□ -1.92
CUP1-2YHR055C PEX5P35056 612 aa3.06□□□□□ -1.92
CUP1-2YHR055C MRPL27P36526 146 aaPredicted RBP3.06□□□□□ -1.92
CUP1-2YHR055C PEX22P39718 180 aa3.06□□□□□ -1.92
CUP1-2YHR055C YGR018CP53211 109 aa3.06□□□□□ -1.92
CUP1-2YHR055C RSC1P53236 928 aa3.06□□□□□ -1.92
CUP1-2YHR055C VHT1P53241 593 aa3.06□□□□□ -1.92
CUP1-2YHR055C YHC1Q05900 231 aaKnown RBP3.06□□□□□ -1.92
CUP1-2YHR055C ASP3-2P0CX77 362 aa3.05□□□□□ -1.92
CUP1-2YHR055C ASP3-3P0CX78 362 aa3.05□□□□□ -1.92
CUP1-2YHR055C ASP3-4P0CX79 362 aa3.05□□□□□ -1.92
CUP1-2YHR055C ASP3-1P0CZ17 362 aa3.05□□□□□ -1.92
CUP1-2YHR055C RRP7P25368 297 aaPredicted RBP3.05□□□□□ -1.92
CUP1-2YHR055C RPL16AP26784 199 aaKnown RBP3.05□□□□□ -1.92
CUP1-2YHR055C MDL1P33310 695 aa3.05□□□□□ -1.92
CUP1-2YHR055C SPP381P38282 291 aaPredicted RBP3.05□□□□□ -1.92
CUP1-2YHR055C LRP1P38801 184 aaKnown RBP3.05□□□□□ -1.92
CUP1-2YHR055C MLH1P38920 769 aa3.05□□□□□ -1.92
CUP1-2YHR055C YFL012WP43580 148 aa3.05□□□□□ -1.92
CUP1-2YHR055C ABM1P47146 123 aa3.05□□□□□ -1.92
CUP1-2YHR055C PGU1P47180 361 aa3.05□□□□□ -1.92
CUP1-2YHR055C NOP6Q07623 225 aaKnown RBP3.05□□□□□ -1.92
CUP1-2YHR055C IES4Q08561 116 aa3.05□□□□□ -1.92
CUP1-2YHR055C ERP4Q12450 207 aa3.05□□□□□ -1.92
CUP1-2YHR055C ZUO1P32527 433 aaKnown RBP3.04□□□□□ -1.92
CUP1-2YHR055C YBL028CP38202 106 aa3.04□□□□□ -1.92
CUP1-2YHR055C EPL1P43572 832 aa3.04□□□□□ -1.92
CUP1-2YHR055C PRP38Q00723 242 aaPredicted RBP3.04□□□□□ -1.92
CUP1-2YHR055C SFM1Q12314 213 aa3.04□□□□□ -1.92
CUP1-2YHR055C LDS1P31379 325 aa3.03□□□□□ -1.92
CUP1-2YHR055C ECT1P33412 323 aa3.03□□□□□ -1.92
CUP1-2YHR055C YER184CP39961 794 aa3.03□□□□□ -1.92
CUP1-2YHR055C CIN2P46670 268 aa3.03□□□□□ -1.92
CUP1-2YHR055C RPL21AQ02753 160 aaKnown RBP3.03□□□□□ -1.92
CUP1-2YHR055C YDR115WQ04598 105 aa3.03□□□□□ -1.92
CUP1-2YHR055C FSH2Q05015 223 aa3.03□□□□□ -1.92
CUP1-2YHR055C YDR061WQ12298 539 aa3.03□□□□□ -1.92
CUP1-2YHR055C LDB17Q12342 491 aa3.03□□□□□ -1.92
CUP1-2YHR055C RPL21BQ12672 160 aaKnown RBP3.03□□□□□ -1.92
CUP1-2YHR055C HEM4P06174 275 aa3.02□□□□□ -1.93
CUP1-2YHR055C YHR177WP38867 453 aa3.02□□□□□ -1.93
CUP1-2YHR055C KEG1P43614 200 aa3.02□□□□□ -1.93
CUP1-2YHR055C MLC1P53141 149 aa3.02□□□□□ -1.93
CUP1-2YHR055C YLR177WQ06251 628 aa3.02□□□□□ -1.93
CUP1-2YHR055C SHS1Q07657 551 aa3.02□□□□□ -1.93
CUP1-2YHR055C YDL109CQ12103 647 aa3.02□□□□□ -1.93
CUP1-2YHR055C MCT1Q12283 360 aa3.02□□□□□ -1.93
CUP1-2YHR055C RPL6BP05739 176 aaKnown RBP3.01□□□□□ -1.93
CUP1-2YHR055C MAS2P11914 482 aa3.01□□□□□ -1.93
CUP1-2YHR055C CHA1P25379 360 aaKnown RBP3.01□□□□□ -1.93
CUP1-2YHR055C SSE1P32589 693 aaKnown RBP3.01□□□□□ -1.93
CUP1-2YHR055C COS9P36034 407 aa3.01□□□□□ -1.93
CUP1-2YHR055C WSS1P38838 269 aa3.01□□□□□ -1.93
CUP1-2YHR055C VAC7P53950 1165 aa3.01□□□□□ -1.93
CUP1-2YHR055C RPL6AQ02326 176 aaKnown RBP3.01□□□□□ -1.93
CUP1-2YHR055C GAT3Q07928 141 aa3.01□□□□□ -1.93
CUP1-2YHR055C YBR241CP38142 488 aa3□□□□□ -1.93
CUP1-2YHR055C GDT1P38301 280 aaPredicted RBP3□□□□□ -1.93
CUP1-2YHR055C SEC28P40509 296 aaKnown RBP3□□□□□ -1.93
CUP1-2YHR055C RNH201P53942 307 aa3□□□□□ -1.93
CUP1-2YHR055C YFH1Q07540 174 aa3□□□□□ -1.93
CUP1-2YHR055C HIF1Q12373 385 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms