RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W GDT1P38301 280 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W PZF1P39933 429 aa4.42□□□□□ -1.7
VPS29YHR012W AST2P39945 430 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W YMR144WP40214 342 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W JEM1P40358 645 aa4.42□□□□□ -1.7
VPS29YHR012W REE1P40893 198 aa4.42□□□□□ -1.7
VPS29YHR012W ACS2P52910 683 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W IMA1P53051 589 aa4.42□□□□□ -1.7
VPS29YHR012W LSG1P53145 640 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W YGR066CP53242 292 aa4.42□□□□□ -1.7
VPS29YHR012W MPA43P53583 542 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W MMT1Q03218 510 aa4.42□□□□□ -1.7
VPS29YHR012W SDC1Q03323 175 aa4.42□□□□□ -1.7
VPS29YHR012W GIS1Q03833 894 aa4.42□□□□□ -1.7
VPS29YHR012W HRI1Q05905 244 aaKnown RBP4.42□□□□□ -1.7
VPS29YHR012W YEH2Q07950 538 aa4.42□□□□□ -1.7
VPS29YHR012W RRG7Q08774 242 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W YOR214CQ12282 236 aa4.42□□□□□ -1.7
VPS29YHR012W JLP1Q12358 412 aa4.42□□□□□ -1.7
VPS29YHR012W NOT5Q12514 560 aaPredicted RBP4.42□□□□□ -1.7
VPS29YHR012W ZWF1P11412 505 aaKnown RBP4.41□□□□□ -1.7
VPS29YHR012W BAR1P12630 587 aa4.41□□□□□ -1.7
VPS29YHR012W CBS1P14066 229 aa4.41□□□□□ -1.7
VPS29YHR012W REC107P21651 314 aa4.41□□□□□ -1.7
VPS29YHR012W MEF1P25039 761 aa4.41□□□□□ -1.7
VPS29YHR012W RAD51P25454 400 aa4.41□□□□□ -1.7
VPS29YHR012W YIM1P28625 365 aa4.41□□□□□ -1.7
VPS29YHR012W HSP150P32478 413 aa4.41□□□□□ -1.7
VPS29YHR012W RSM22P36056 628 aa4.41□□□□□ -1.7
VPS29YHR012W YMR262WP38430 313 aa4.41□□□□□ -1.7
VPS29YHR012W STP2P38704 541 aa4.41□□□□□ -1.7
VPS29YHR012W NSG1P38837 291 aa4.41□□□□□ -1.7
VPS29YHR012W BLM10P43583 2143 aa4.41□□□□□ -1.7
VPS29YHR012W PTR3P43606 678 aa4.41□□□□□ -1.7
VPS29YHR012W DBP6P53734 629 aaKnown RBP4.41□□□□□ -1.7
VPS29YHR012W RHO5P53879 331 aaKnown RBP4.41□□□□□ -1.7
VPS29YHR012W YMR010WQ03687 405 aa4.41□□□□□ -1.7
VPS29YHR012W YHC1Q05900 231 aaKnown RBP4.41□□□□□ -1.7
VPS29YHR012W SEI1Q06058 285 aa4.41□□□□□ -1.7
VPS29YHR012W FMP40Q08968 688 aaPredicted RBP4.41□□□□□ -1.7
VPS29YHR012W SLF1Q12034 447 aaKnown RBP4.41□□□□□ -1.7
VPS29YHR012W RPN6Q12377 434 aa4.41□□□□□ -1.7
VPS29YHR012W PFK27Q12471 397 aaPredicted RBP4.41□□□□□ -1.7
VPS29YHR012W HTS1P07263 546 aaKnown RBP4.4□□□□□ -1.71
VPS29YHR012W RAP1P11938 827 aa4.4□□□□□ -1.71
VPS29YHR012W GAL3P13045 520 aa4.4□□□□□ -1.71
VPS29YHR012W SAC7P17121 654 aa4.4□□□□□ -1.71
VPS29YHR012W YAP1P19880 650 aaKnown RBP4.4□□□□□ -1.71
VPS29YHR012W DBP3P20447 523 aaKnown RBP4.4□□□□□ -1.71
VPS29YHR012W AIM17P23180 465 aaKnown RBP4.4□□□□□ -1.71
VPS29YHR012W CLB3P24870 427 aa4.4□□□□□ -1.71
VPS29YHR012W EHD3P28817 500 aa4.4□□□□□ -1.71
VPS29YHR012W NGG1P32494 702 aa4.4□□□□□ -1.71
VPS29YHR012W TUL1P36096 758 aa4.4□□□□□ -1.71
VPS29YHR012W MGE1P38523 228 aa4.4□□□□□ -1.71
VPS29YHR012W YHR177WP38867 453 aa4.4□□□□□ -1.71
VPS29YHR012W ZRG8P40021 1076 aa4.4□□□□□ -1.71
VPS29YHR012W YTA6P40328 754 aa4.4□□□□□ -1.71
VPS29YHR012W ALG5P40350 334 aa4.4□□□□□ -1.71
VPS29YHR012W LEM3P42838 414 aa4.4□□□□□ -1.71
VPS29YHR012W TRS85P46944 698 aa4.4□□□□□ -1.71
VPS29YHR012W INN1P53901 409 aa4.4□□□□□ -1.71
VPS29YHR012W YPL039WQ03080 316 aa4.4□□□□□ -1.71
VPS29YHR012W NAT4Q04751 285 aa4.4□□□□□ -1.71
VPS29YHR012W YOL131WQ08270 108 aa4.4□□□□□ -1.71
VPS29YHR012W MED7Q08278 222 aa4.4□□□□□ -1.71
VPS29YHR012W BSC1Q12140 328 aa4.4□□□□□ -1.71
VPS29YHR012W HER1Q12276 1246 aa4.4□□□□□ -1.71
VPS29YHR012W SNF8Q12483 233 aa4.4□□□□□ -1.71
VPS29YHR012W TOP3P13099 656 aa4.39□□□□□ -1.71
VPS29YHR012W NFS1P25374 497 aa4.39□□□□□ -1.71
VPS29YHR012W MLF3P32047 452 aa4.39□□□□□ -1.71
VPS29YHR012W YPT7P32939 208 aa4.39□□□□□ -1.71
VPS29YHR012W HIS7P33734 552 aaKnown RBP4.39□□□□□ -1.71
VPS29YHR012W PTC1P35182 281 aa4.39□□□□□ -1.71
VPS29YHR012W MRPL17P36528 281 aa4.39□□□□□ -1.71
VPS29YHR012W ANS1P38832 159 aa4.39□□□□□ -1.71
VPS29YHR012W RIX1P38883 763 aaPredicted RBP4.39□□□□□ -1.71
VPS29YHR012W ECM10P39987 644 aa4.39□□□□□ -1.71
VPS29YHR012W YER010CP40011 234 aa4.39□□□□□ -1.71
VPS29YHR012W RGI1P40043 161 aaPredicted RBP4.39□□□□□ -1.71
VPS29YHR012W SHO1P40073 367 aa4.39□□□□□ -1.71
VPS29YHR012W YIL169CP40442 995 aa4.39□□□□□ -1.71
VPS29YHR012W SMK1P41808 388 aa4.39□□□□□ -1.71
VPS29YHR012W MAL12P53341 584 aa4.39□□□□□ -1.71
VPS29YHR012W YMR102CQ03177 834 aa4.39□□□□□ -1.71
VPS29YHR012W RIM13Q03792 727 aa4.39□□□□□ -1.71
VPS29YHR012W YKU80Q04437 629 aa4.39□□□□□ -1.71
VPS29YHR012W GLO2Q05584 274 aa4.39□□□□□ -1.71
VPS29YHR012W PSY3Q12318 242 aa4.39□□□□□ -1.71
VPS29YHR012W SPO24Q3E752 67 aa4.39□□□□□ -1.71
VPS29YHR012W PUT2P07275 575 aa4.38□□□□□ -1.71
VPS29YHR012W THR1P17423 357 aaKnown RBP4.38□□□□□ -1.71
VPS29YHR012W UTR1P21373 530 aa4.38□□□□□ -1.71
VPS29YHR012W COQ2P32378 372 aa4.38□□□□□ -1.71
VPS29YHR012W CHK1P38147 527 aa4.38□□□□□ -1.71
VPS29YHR012W PRS3P38689 320 aaKnown RBP4.38□□□□□ -1.71
VPS29YHR012W MNN9P39107 395 aaKnown RBP4.38□□□□□ -1.71
VPS29YHR012W SEN34P39707 275 aa4.38□□□□□ -1.71
VPS29YHR012W TDA10P42938 290 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms