RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	HST1	P53685	503 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	PRP3	Q03338	469 aa	Predicted RBP	2.74	□□□□□ -1.97
SPO11	YHL022C	ASA1	Q06822	443 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	YPS3	Q12303	508 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	ISA2	Q12425	185 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	PCL9	Q12477	304 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	BI3	Q9ZZW7	517 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	PHO91	P27514	894 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	PDC2	P32896	925 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	WSS1	P38838	269 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	CHL4	P38907	458 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	PFS2	P42841	465 aa	Known RBP	2.73	□□□□□ -1.97
SPO11	YHL022C	SEH1	P53011	349 aa	Known RBP	2.73	□□□□□ -1.97
SPO11	YHL022C	REX2	P54964	269 aa	Known RBP	2.73	□□□□□ -1.97
SPO11	YHL022C	VPS72	Q03388	795 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	SPC19	Q03954	165 aa		2.73	□□□□□ -1.97
SPO11	YHL022C	CHA1	P25379	360 aa	Known RBP	2.72	□□□□□ -1.97
SPO11	YHL022C	DBF4	P32325	704 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	FMT1	P32785	401 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	DOA1	P36037	715 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	SOL2	P37262	315 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	PRP38	Q00723	242 aa	Predicted RBP	2.72	□□□□□ -1.97
SPO11	YHL022C	URC2	Q04411	772 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	DCI1	Q08558	271 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	YOR376W	Q08900	122 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	RFM1	Q12192	310 aa		2.72	□□□□□ -1.97
SPO11	YHL022C	TIR4	Q12218	487 aa	Predicted RBP	2.72	□□□□□ -1.97
SPO11	YHL022C	RPS18A	P0CX55	146 aa	Known RBP	2.71	□□□□□ -1.98
SPO11	YHL022C	RPS18B	P0CX56	146 aa	Predicted RBP	2.71	□□□□□ -1.98
SPO11	YHL022C	ARF1	P11076	181 aa	Known RBP	2.71	□□□□□ -1.98
SPO11	YHL022C	TRF5	P48561	642 aa	Known RBP	2.71	□□□□□ -1.98
SPO11	YHL022C	MSC3	Q05812	728 aa		2.71	□□□□□ -1.98
SPO11	YHL022C	YLR177W	Q06251	628 aa		2.71	□□□□□ -1.98
SPO11	YHL022C	TPI1	P00942	248 aa	Known RBP	2.7	□□□□□ -1.98
SPO11	YHL022C	PDE2	P06776	526 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	MSP1	P28737	362 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	CIN2	P46670	268 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	VAC7	P53950	1165 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	YDR115W	Q04598	105 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	GPM3	Q12326	303 aa		2.7	□□□□□ -1.98
SPO11	YHL022C	MEX67	Q99257	599 aa	Known RBP	2.7	□□□□□ -1.98
SPO11	YHL022C	TOA1	P32773	286 aa		2.69	□□□□□ -1.98
SPO11	YHL022C	PEX22	P39718	180 aa		2.69	□□□□□ -1.98
SPO11	YHL022C	MEH1	Q02205	184 aa		2.69	□□□□□ -1.98
SPO11	YHL022C	YDR061W	Q12298	539 aa		2.69	□□□□□ -1.98
SPO11	YHL022C	HMS1	Q12398	434 aa		2.69	□□□□□ -1.98
SPO11	YHL022C	MAS2	P11914	482 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	ANP1	P32629	500 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	LTV1	P34078	463 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	SMP1	P38128	452 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	FHL1	P39521	936 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	PAC11	P40960	533 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	CTK3	P46963	296 aa	Predicted RBP	2.68	□□□□□ -1.98
SPO11	YHL022C	IGO1	P53897	168 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	LDS2	Q08218	356 aa		2.68	□□□□□ -1.98
SPO11	YHL022C	SLF1	Q12034	447 aa	Known RBP	2.68	□□□□□ -1.98
SPO11	YHL022C	RPS19A	P07280	144 aa	Known RBP	2.67	□□□□□ -1.98
SPO11	YHL022C	RPS19B	P07281	144 aa	Predicted RBP	2.67	□□□□□ -1.98
SPO11	YHL022C	TPS2	P31688	896 aa	Known RBP	2.67	□□□□□ -1.98
SPO11	YHL022C	PRY2	P36110	329 aa		2.67	□□□□□ -1.98
SPO11	YHL022C	SEC27	P41811	889 aa	Known RBP	2.67	□□□□□ -1.98
SPO11	YHL022C	VEL1	P53058	206 aa		2.67	□□□□□ -1.98
SPO11	YHL022C	YGR067C	P53243	804 aa		2.67	□□□□□ -1.98
SPO11	YHL022C	SFM1	Q12314	213 aa		2.67	□□□□□ -1.98
SPO11	YHL022C	RNA1	P11745	407 aa	Known RBP	2.66	□□□□□ -1.98
SPO11	YHL022C	RTT102	P53330	157 aa		2.66	□□□□□ -1.98
SPO11	YHL022C	GAT3	Q07928	141 aa		2.66	□□□□□ -1.98
SPO11	YHL022C	SRO7	Q12038	1033 aa		2.66	□□□□□ -1.98
SPO11	YHL022C	HIF1	Q12373	385 aa		2.66	□□□□□ -1.98
SPO11	YHL022C	YOL085C	Q99345	113 aa		2.66	□□□□□ -1.98
SPO11	YHL022C	ASP3-2	P0CX77	362 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	ASP3-3	P0CX78	362 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	ASP3-4	P0CX79	362 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	ASP3-1	P0CZ17	362 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	YDR541C	Q03049	344 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	ERO1	Q03103	563 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	YMR010W	Q03687	405 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	NDL1	Q06568	189 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	NOP6	Q07623	225 aa	Known RBP	2.65	□□□□□ -1.99
SPO11	YHL022C	LDB17	Q12342	491 aa		2.65	□□□□□ -1.99
SPO11	YHL022C	YBR241C	P38142	488 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	YHR177W	P38867	453 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	MNL1	P38888	796 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	BIO3	P50277	480 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	FSH2	Q05015	223 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	YPR195C	Q06594	109 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	AAD15	Q08361	143 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	ATP16	Q12165	160 aa		2.64	□□□□□ -1.99
SPO11	YHL022C	LDS1	P31379	325 aa		2.63	□□□□□ -1.99
SPO11	YHL022C	ECM34	P38728	170 aa		2.63	□□□□□ -1.99
SPO11	YHL022C	FRT2	P39734	528 aa		2.63	□□□□□ -1.99
SPO11	YHL022C	ASN2	P49090	572 aa	Known RBP	2.63	□□□□□ -1.99
SPO11	YHL022C	CWC22	P53333	577 aa	Known RBP	2.63	□□□□□ -1.99
SPO11	YHL022C	RMI1	Q02685	241 aa		2.63	□□□□□ -1.99
SPO11	YHL022C	GYL1	Q04322	720 aa		2.63	□□□□□ -1.99
SPO11	YHL022C	HEM4	P06174	275 aa		2.62	□□□□□ -1.99
SPO11	YHL022C	UNG1	P12887	359 aa		2.62	□□□□□ -1.99
SPO11	YHL022C	CYM1	P32898	989 aa		2.62	□□□□□ -1.99
SPO11	YHL022C	SPP381	P38282	291 aa	Predicted RBP	2.62	□□□□□ -1.99
SPO11	YHL022C	COQ5	P49017	307 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms