RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHC1	YER096W	SMA2	Q04658	369 aa		7.24	□□□□□ -1.25
SHC1	YER096W	EMG1	Q06287	252 aa	Known RBP	7.24	□□□□□ -1.25
SHC1	YER096W	SKI7	Q08491	747 aa	Predicted RBP	7.24	□□□□□ -1.25
SHC1	YER096W	YGK3	Q12222	375 aa	Predicted RBP	7.24	□□□□□ -1.25
SHC1	YER096W	BAR1	P12630	587 aa		7.23	□□□□□ -1.25
SHC1	YER096W	YCR100C	P25606	316 aa		7.23	□□□□□ -1.25
SHC1	YER096W	PRP21	P32524	280 aa	Predicted RBP	7.23	□□□□□ -1.25
SHC1	YER096W	MRPL15	P36523	253 aa		7.23	□□□□□ -1.25
SHC1	YER096W	SEA4	P38164	1038 aa		7.23	□□□□□ -1.25
SHC1	YER096W	OCA5	P38738	679 aa		7.23	□□□□□ -1.25
SHC1	YER096W	SSZ1	P38788	538 aa	Known RBP	7.23	□□□□□ -1.25
SHC1	YER096W	CTF8	P38877	133 aa		7.23	□□□□□ -1.25
SHC1	YER096W	AST2	P39945	430 aa	Known RBP	7.23	□□□□□ -1.25
SHC1	YER096W	RRG9	P40156	214 aa		7.23	□□□□□ -1.25
SHC1	YER096W	AAD10	P47182	288 aa		7.23	□□□□□ -1.25
SHC1	YER096W	NUP57	P48837	541 aa		7.23	□□□□□ -1.25
SHC1	YER096W	YPL068C	Q02749	293 aa		7.23	□□□□□ -1.25
SHC1	YER096W	ATG17	Q06410	417 aa		7.23	□□□□□ -1.25
SHC1	YER096W	ARV1	Q06541	321 aa		7.23	□□□□□ -1.25
SHC1	YER096W	YPR091C	Q06833	770 aa		7.23	□□□□□ -1.25
SHC1	YER096W	YOL073C	Q08232	322 aa		7.23	□□□□□ -1.25
SHC1	YER096W	YDL211C	Q12121	372 aa		7.23	□□□□□ -1.25
SHC1	YER096W	IRA1	P18963	3092 aa		7.23	□□□□□ -1.25
SHC1	YER096W	BRR2	P32639	2163 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	SAM35	P14693	329 aa		7.22	□□□□□ -1.25
SHC1	YER096W	GPI12	P23797	304 aa		7.22	□□□□□ -1.25
SHC1	YER096W	RRP7	P25368	297 aa	Predicted RBP	7.22	□□□□□ -1.25
SHC1	YER096W	FAA1	P30624	700 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	SEC61	P32915	480 aa		7.22	□□□□□ -1.25
SHC1	YER096W	MAE1	P36013	669 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	YHR097C	P38809	366 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	IPT1	P38954	527 aa		7.22	□□□□□ -1.25
SHC1	YER096W	PAC1	P39946	494 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	YEL068C	P39977	110 aa		7.22	□□□□□ -1.25
SHC1	YER096W	ICE2	P40499	491 aa		7.22	□□□□□ -1.25
SHC1	YER096W	ALB1	P47019	175 aa	Predicted RBP	7.22	□□□□□ -1.25
SHC1	YER096W	MPA43	P53583	542 aa	Predicted RBP	7.22	□□□□□ -1.25
SHC1	YER096W	YMD8	Q03697	442 aa		7.22	□□□□□ -1.25
SHC1	YER096W	GSH2	Q08220	491 aa		7.22	□□□□□ -1.25
SHC1	YER096W	YOR365C	Q08844	703 aa		7.22	□□□□□ -1.25
SHC1	YER096W	CAR2	P07991	424 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	YOL163W	P0CF20	169 aa		7.22	□□□□□ -1.25
SHC1	YER096W	PRP19	P32523	503 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	HBS1	P32769	611 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	ARC19	P33204	171 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	TAF14	P35189	244 aa		7.22	□□□□□ -1.25
SHC1	YER096W	TEF4	P36008	412 aa	Known RBP	7.22	□□□□□ -1.25
SHC1	YER096W	YOR062C	P36025	268 aa		7.22	□□□□□ -1.25
SHC1	YER096W	ALP1	P38971	573 aa		7.22	□□□□□ -1.25
SHC1	YER096W	KRE29	P40026	464 aa		7.22	□□□□□ -1.25
SHC1	YER096W	YGR067C	P53243	804 aa		7.22	□□□□□ -1.25
SHC1	YER096W	ENT2	Q05785	613 aa		7.22	□□□□□ -1.25
SHC1	YER096W	CRT10	Q08226	957 aa		7.22	□□□□□ -1.25
SHC1	YER096W	YIL046W-A	Q3E7Z4	54 aa		7.22	□□□□□ -1.25
SHC1	YER096W	MED11	Q99278	115 aa		7.22	□□□□□ -1.25
SHC1	YER096W	MET17	P06106	444 aa		7.21	□□□□□ -1.26
SHC1	YER096W	RPL20A	P0CX23	172 aa	Known RBP	7.21	□□□□□ -1.26
SHC1	YER096W	RPL20B	P0CX24	172 aa	Predicted RBP	7.21	□□□□□ -1.26
SHC1	YER096W	ITR2	P30606	609 aa		7.21	□□□□□ -1.26
SHC1	YER096W	RPC82	P32349	654 aa		7.21	□□□□□ -1.26
SHC1	YER096W	KAP122	P32767	1081 aa		7.21	□□□□□ -1.26
SHC1	YER096W	TOD6	P34219	525 aa		7.21	□□□□□ -1.26
SHC1	YER096W	VPS51	P36116	164 aa		7.21	□□□□□ -1.26
SHC1	YER096W	RTC2	P38279	296 aa		7.21	□□□□□ -1.26
SHC1	YER096W	SBE22	P38814	852 aa		7.21	□□□□□ -1.26
SHC1	YER096W	ISC1	P40015	477 aa	Known RBP	7.21	□□□□□ -1.26
SHC1	YER096W	YNL208W	P40159	199 aa	Known RBP	7.21	□□□□□ -1.26
SHC1	YER096W	SMK1	P41808	388 aa		7.21	□□□□□ -1.26
SHC1	YER096W	BAP3	P41815	604 aa		7.21	□□□□□ -1.26
SHC1	YER096W	SWP82	P43554	623 aa		7.21	□□□□□ -1.26
SHC1	YER096W	YAT1	P80235	687 aa		7.21	□□□□□ -1.26
SHC1	YER096W	SIZ1	Q04195	904 aa		7.21	□□□□□ -1.26
SHC1	YER096W	YPR015C	Q12531	247 aa		7.21	□□□□□ -1.26
SHC1	YER096W	ENA1	P13587	1091 aa		7.2	□□□□□ -1.26
SHC1	YER096W	TFS1	P14306	219 aa		7.2	□□□□□ -1.26
SHC1	YER096W	TAL1	P15019	335 aa	Known RBP	7.2	□□□□□ -1.26
SHC1	YER096W	DAL82	P21705	255 aa		7.2	□□□□□ -1.26
SHC1	YER096W	BUD5	P25300	642 aa	Predicted RBP	7.2	□□□□□ -1.26
SHC1	YER096W	YKR015C	P36111	568 aa		7.2	□□□□□ -1.26
SHC1	YER096W	BET3	P36149	193 aa		7.2	□□□□□ -1.26
SHC1	YER096W	RIX1	P38883	763 aa	Predicted RBP	7.2	□□□□□ -1.26
SHC1	YER096W	ENA2	Q01896	1091 aa		7.2	□□□□□ -1.26
SHC1	YER096W	ABZ2	Q03266	374 aa		7.2	□□□□□ -1.26
SHC1	YER096W	NBA1	Q08229	501 aa	Known RBP	7.2	□□□□□ -1.26
SHC1	YER096W	BDS1	Q08347	646 aa		7.2	□□□□□ -1.26
SHC1	YER096W	TRM10	Q12400	293 aa		7.2	□□□□□ -1.26
SHC1	YER096W	NPC2	Q12408	173 aa		7.2	□□□□□ -1.26
SHC1	YER096W	ENA5	Q12691	1091 aa		7.2	□□□□□ -1.26
SHC1	YER096W	SNO3	P43544	222 aa		7.19	□□□□□ -1.26
SHC1	YER096W	ALR2	P43553	858 aa		7.19	□□□□□ -1.26
SHC1	YER096W	BAT2	P47176	376 aa	Known RBP	7.19	□□□□□ -1.26
SHC1	YER096W	BUD9	P53226	547 aa		7.19	□□□□□ -1.26
SHC1	YER096W	YGR168C	P53293	376 aa		7.19	□□□□□ -1.26
SHC1	YER096W	RNH70	P53331	553 aa		7.19	□□□□□ -1.26
SHC1	YER096W	TRS23	Q03784	219 aa		7.19	□□□□□ -1.26
SHC1	YER096W	ELP6	Q04868	273 aa		7.19	□□□□□ -1.26
SHC1	YER096W	YPR172W	Q06608	200 aa		7.19	□□□□□ -1.26
SHC1	YER096W	YEH1	Q07804	573 aa		7.19	□□□□□ -1.26
SHC1	YER096W	NTG2	Q08214	380 aa		7.19	□□□□□ -1.26
SHC1	YER096W	SIA1	Q12212	622 aa		7.19	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms