RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W ASM4Q05166 528 aa3.91□□□□□ -1.78
TPA1YER049W VPS74Q06385 345 aa3.91□□□□□ -1.78
TPA1YER049W ICL2Q12031 575 aa3.91□□□□□ -1.78
TPA1YER049W RPN5Q12250 445 aaKnown RBP3.91□□□□□ -1.78
TPA1YER049W YOR012WQ12351 137 aa3.91□□□□□ -1.78
TPA1YER049W YBR298C-AQ8TGK4 73 aa3.91□□□□□ -1.78
TPA1YER049W ATP4P05626 244 aa3.91□□□□□ -1.78
TPA1YER049W SIR3P06701 978 aa3.91□□□□□ -1.78
TPA1YER049W STE3P06783 470 aa3.91□□□□□ -1.78
TPA1YER049W CDC21P06785 304 aa3.91□□□□□ -1.78
TPA1YER049W YAR066WP0CX18 203 aa3.91□□□□□ -1.78
TPA1YER049W YHR214WP0CX19 203 aa3.91□□□□□ -1.78
TPA1YER049W KAR1P11927 433 aa3.91□□□□□ -1.78
TPA1YER049W SIR1P21691 654 aa3.91□□□□□ -1.78
TPA1YER049W SGV1P23293 657 aaKnown RBP3.91□□□□□ -1.78
TPA1YER049W FUB1P25659 250 aa3.91□□□□□ -1.78
TPA1YER049W VPH1P32563 840 aaKnown RBP3.91□□□□□ -1.78
TPA1YER049W TOD6P34219 525 aa3.91□□□□□ -1.78
TPA1YER049W DHR2P36009 735 aaPredicted RBP3.91□□□□□ -1.78
TPA1YER049W PIM1P36775 1133 aa3.91□□□□□ -1.78
TPA1YER049W NAT2P37293 288 aa3.91□□□□□ -1.78
TPA1YER049W APE3P37302 537 aaKnown RBP3.91□□□□□ -1.78
TPA1YER049W COS111P38308 924 aa3.91□□□□□ -1.78
TPA1YER049W SSU1P41930 458 aa3.91□□□□□ -1.78
TPA1YER049W DUG1P43616 481 aaKnown RBP3.91□□□□□ -1.78
TPA1YER049W NIT2P47016 307 aa3.91□□□□□ -1.78
TPA1YER049W MDV1P47025 714 aa3.91□□□□□ -1.78
TPA1YER049W YAE1P47118 141 aaPredicted RBP3.91□□□□□ -1.78
TPA1YER049W AMA1P50082 593 aa3.91□□□□□ -1.78
TPA1YER049W VPS62P53285 467 aa3.91□□□□□ -1.78
TPA1YER049W GOR1P53839 350 aa3.91□□□□□ -1.78
TPA1YER049W MRPL22P53881 309 aa3.91□□□□□ -1.78
TPA1YER049W MET31Q03081 177 aa3.91□□□□□ -1.78
TPA1YER049W DML1Q03652 475 aa3.91□□□□□ -1.78
TPA1YER049W YNG1Q08465 219 aa3.91□□□□□ -1.78
TPA1YER049W RRP42Q12277 265 aaPredicted RBP3.91□□□□□ -1.78
TPA1YER049W YOR214CQ12282 236 aa3.91□□□□□ -1.78
TPA1YER049W YDR061WQ12298 539 aa3.91□□□□□ -1.78
TPA1YER049W ATG31Q12421 196 aa3.91□□□□□ -1.78
TPA1YER049W YOR019WQ99248 730 aa3.91□□□□□ -1.78
TPA1YER049W URA3P03962 267 aa3.9□□□□□ -1.78
TPA1YER049W HIS5P07172 385 aa3.9□□□□□ -1.78
TPA1YER049W RPC40P07703 335 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W RPS21AP0C0V8 87 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W PPH22P23595 377 aa3.9□□□□□ -1.78
TPA1YER049W IDH1P28834 360 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
TPA1YER049W OAC1P32332 324 aa3.9□□□□□ -1.78
TPA1YER049W GSH1P32477 678 aa3.9□□□□□ -1.78
TPA1YER049W LOT5P34234 306 aa3.9□□□□□ -1.78
TPA1YER049W OMA1P36163 345 aa3.9□□□□□ -1.78
TPA1YER049W MRPL40P36534 297 aa3.9□□□□□ -1.78
TPA1YER049W MLH1P38920 769 aa3.9□□□□□ -1.78
TPA1YER049W YER137CP40083 148 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W GPP2P40106 250 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W GDS1P41913 522 aa3.9□□□□□ -1.78
TPA1YER049W YJL043WP47053 257 aa3.9□□□□□ -1.78
TPA1YER049W ECL1P48235 211 aa3.9□□□□□ -1.78
TPA1YER049W YNL034WP53963 612 aa3.9□□□□□ -1.78
TPA1YER049W NUP116Q02630 1113 aa3.9□□□□□ -1.78
TPA1YER049W GCN5Q03330 439 aa3.9□□□□□ -1.78
TPA1YER049W TRM82Q03774 444 aa3.9□□□□□ -1.78
TPA1YER049W YAP6Q03935 383 aa3.9□□□□□ -1.78
TPA1YER049W DLT1Q04216 342 aa3.9□□□□□ -1.78
TPA1YER049W YMR034CQ05131 434 aaPredicted RBP3.9□□□□□ -1.78
TPA1YER049W ATG38Q05789 226 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W SPO77Q06134 477 aa3.9□□□□□ -1.78
TPA1YER049W VPS36Q06696 566 aa3.9□□□□□ -1.78
TPA1YER049W YPL245WQ12179 454 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W PST1Q12355 444 aa3.9□□□□□ -1.78
TPA1YER049W PEX11Q12462 236 aa3.9□□□□□ -1.78
TPA1YER049W MRX4Q12467 430 aa3.9□□□□□ -1.78
TPA1YER049W RPS21BQ3E754 87 aaKnown RBP3.9□□□□□ -1.78
TPA1YER049W SUS1Q6WNK7 96 aa3.9□□□□□ -1.78
TPA1YER049W YLR422WQ06409 1932 aa3.9□□□□□ -1.79
TPA1YER049W SLH1P53327 1967 aaKnown RBP3.9□□□□□ -1.79
TPA1YER049W HIS3P06633 220 aa3.89□□□□□ -1.79
TPA1YER049W SST2P11972 698 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W KGD2P19262 463 aaPredicted RBP3.89□□□□□ -1.79
TPA1YER049W CAT2P32796 670 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W SPO23P33757 523 aa3.89□□□□□ -1.79
TPA1YER049W TAF14P35189 244 aa3.89□□□□□ -1.79
TPA1YER049W YPT52P36018 234 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W SOL2P37262 315 aa3.89□□□□□ -1.79
TPA1YER049W SBE22P38814 852 aa3.89□□□□□ -1.79
TPA1YER049W NVJ1P38881 321 aa3.89□□□□□ -1.79
TPA1YER049W VRG4P40107 337 aa3.89□□□□□ -1.79
TPA1YER049W UFE1P41834 346 aa3.89□□□□□ -1.79
TPA1YER049W CHA4P43634 648 aa3.89□□□□□ -1.79
TPA1YER049W LEE1Q02799 301 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W GIP3Q03016 1276 aa3.89□□□□□ -1.79
TPA1YER049W HER2Q03557 464 aa3.89□□□□□ -1.79
TPA1YER049W RRP45Q05636 305 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W ASR1Q06834 288 aa3.89□□□□□ -1.79
TPA1YER049W RRG7Q08774 242 aaPredicted RBP3.89□□□□□ -1.79
TPA1YER049W YPL199CQ08954 240 aa3.89□□□□□ -1.79
TPA1YER049W ATP16Q12165 160 aa3.89□□□□□ -1.79
TPA1YER049W SFM1Q12314 213 aa3.89□□□□□ -1.79
TPA1YER049W PET54P10834 293 aa3.89□□□□□ -1.79
TPA1YER049W RPS1BP23248 255 aaKnown RBP3.89□□□□□ -1.79
TPA1YER049W SED4P25365 1065 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 107.9 ms