RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene SLD5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD5	YDR489W	PDR16	P53860	351 aa	Known RBP	2.66	□□□□□ -1.98
SLD5	YDR489W	YNL143C	P53908	130 aa		2.66	□□□□□ -1.98
SLD5	YDR489W	TSA2	Q04120	196 aa		2.66	□□□□□ -1.98
SLD5	YDR489W	GAT3	Q07928	141 aa		2.66	□□□□□ -1.98
SLD5	YDR489W	PGC1	Q08959	321 aa		2.66	□□□□□ -1.98
SLD5	YDR489W	WTM1	Q12363	437 aa	Known RBP	2.66	□□□□□ -1.98
SLD5	YDR489W	NAM2	P11325	894 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	MAS2	P11914	482 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	DBR1	P24309	405 aa	Known RBP	2.65	□□□□□ -1.99
SLD5	YDR489W	GRR1	P24814	1151 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	YHR122W	P38829	231 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	YHR131C	P38835	850 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	BAT1	P38891	393 aa	Known RBP	2.65	□□□□□ -1.99
SLD5	YDR489W	RPA34	P47006	233 aa	Predicted RBP	2.65	□□□□□ -1.99
SLD5	YDR489W	CLD1	P53264	445 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	YMR027W	Q04371	470 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	YDR286C	Q05530	114 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	TMC1	Q08422	150 aa	Predicted RBP	2.65	□□□□□ -1.99
SLD5	YDR489W	PSY3	Q12318	242 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	NBL1	Q3E7Y6	73 aa		2.65	□□□□□ -1.99
SLD5	YDR489W	FAR1	P21268	830 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MSK1	P32048	576 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	NUP2	P32499	720 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	RAD5	P32849	1169 aa	Predicted RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	SPO23	P33757	523 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	RTC2	P38279	296 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MIG3	P39943	394 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MAM33	P40513	266 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	SEC27	P41811	889 aa	Known RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	YFR057W	P43625	151 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	FYV8	P46949	817 aa	Known RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	CTK3	P46963	296 aa	Predicted RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	BIR1	P47134	954 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	TIS11	P47977	285 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MPS2	P53159	387 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	YGL039W	P53183	348 aa	Known RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	CRH1	P53301	507 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	YPR091C	Q06833	770 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	PML1	Q07930	204 aa	Predicted RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	PEX27	Q08580	376 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MCT1	Q12283	360 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	YOR012W	Q12351	137 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	YDL199C	Q12407	687 aa		2.64	□□□□□ -1.99
SLD5	YDR489W	MEX67	Q99257	599 aa	Known RBP	2.64	□□□□□ -1.99
SLD5	YDR489W	THR4	P16120	514 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	MRPL8	P22353	238 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	EFB1	P32471	206 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	MRPL10	P36520	322 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	ALD5	P40047	520 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	YER186C	P40101	306 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	LYS12	P40495	371 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	HAC1	P41546	238 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	SHY1	P53266	389 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	TRM112	P53738	135 aa	Predicted RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	SKI8	Q02793	397 aa	Predicted RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	AIM33	Q04516	312 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	PAL1	Q05518	499 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	YHC1	Q05900	231 aa	Known RBP	2.63	□□□□□ -1.99
SLD5	YDR489W	FCY22	Q12119	530 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	PCL9	Q12477	304 aa		2.63	□□□□□ -1.99
SLD5	YDR489W	SAG1	P20840	650 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	AAT2	P23542	418 aa	Known RBP	2.62	□□□□□ -1.99
SLD5	YDR489W	PRR1	P28708	518 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	YBL028C	P38202	106 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	OM14	P38325	134 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	CIN2	P46670	268 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	ADA2	Q02336	434 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	YET2	Q04210	160 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	NAG1	Q8TGN9	163 aa		2.62	□□□□□ -1.99
SLD5	YDR489W	SOD1	P00445	154 aa	Known RBP	2.61	□□□□□ -1.99
SLD5	YDR489W	STE3	P06783	470 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	ZUO1	P32527	433 aa	Known RBP	2.61	□□□□□ -1.99
SLD5	YDR489W	ANP1	P32629	500 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	OXA1	P39952	402 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	HEM14	P40012	539 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	SEC9	P40357	651 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	SHE4	P51534	789 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	CUE3	P53137	624 aa	Known RBP	2.61	□□□□□ -1.99
SLD5	YDR489W	AQR1	P53943	586 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	SLM3	Q12093	417 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	FSH3	Q99369	266 aa		2.61	□□□□□ -1.99
SLD5	YDR489W	MAS1	P10507	462 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	TAL1	P15019	335 aa	Known RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	KRR1	P25586	316 aa	Predicted RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	SSE1	P32589	693 aa	Known RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	PTK1	P36002	662 aa	Predicted RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	LSM12	P38828	187 aa	Known RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	LIN1	P38852	340 aa	Predicted RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	PGU1	P47180	361 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	VAC7	P53950	1165 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	YLH47	Q06493	454 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	SHS1	Q07657	551 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	DET1	Q99288	334 aa	Known RBP	2.6	□□□□□ -1.99
SLD5	YDR489W	YOR338W	Q99326	363 aa		2.6	□□□□□ -1.99
SLD5	YDR489W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
SLD5	YDR489W	VMA2	P16140	517 aa	Known RBP	2.59	□□□□□ -1.99
SLD5	YDR489W	CKI1	P20485	582 aa		2.59	□□□□□ -1.99
SLD5	YDR489W	HMX1	P32339	317 aa		2.59	□□□□□ -1.99
SLD5	YDR489W	SMI1	P32566	505 aa		2.59	□□□□□ -1.99
SLD5	YDR489W	MRPS5	P33759	307 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms