RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	NBL1	Q3E7Y6	73 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	TRA1	P38811	3744 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	TAL1	P15019	335 aa	Known RBP	4.12	□□□□□ -1.75
RPB7	YDR404C	SPO12	P17123	173 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	RDS1	P25611	832 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	TIP1	P27654	210 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB7	YDR404C	NDC1	P32500	655 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	SPP381	P38282	291 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB7	YDR404C	DHH1	P39517	506 aa	Known RBP	4.12	□□□□□ -1.75
RPB7	YDR404C	RRT5	P43607	289 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	YGL242C	P53066	181 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	POP6	P53218	158 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	YNR048W	P53740	393 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	RSN1	Q03516	953 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	BET5	Q03630	159 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	ECM7	Q06200	448 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	SRL1	Q08673	210 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	RNH203	Q12338	110 aa		4.12	□□□□□ -1.75
RPB7	YDR404C	TEF1	P02994	458 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	ARG4	P04076	463 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	STE3	P06783	470 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	MTF1	P14908	341 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	PRP16	P15938	1071 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	CDC23	P16522	626 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	SEC1	P30619	724 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	ATS1	P31386	333 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	MSG5	P38590	489 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	RRF1	P38771	230 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	YPT35	P38815	214 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	ALG8	P40351	577 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	RTT101	P47050	842 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	PRO2	P54885	456 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	STD1	Q02794	444 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	MMT1	Q03218	510 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	TIM18	Q08749	192 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	MUM3	Q08750	479 aa		4.11	□□□□□ -1.75
RPB7	YDR404C	PKH2	Q12236	1081 aa	Known RBP	4.11	□□□□□ -1.75
RPB7	YDR404C	OPI3	P05375	206 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	DAL5	P15365	543 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	PMU1	P36069	295 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	MTC4	P38335	694 aa	Known RBP	4.1	□□□□□ -1.75
RPB7	YDR404C	YHL026C	P38740	315 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	BZZ1	P38822	633 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	GPI8	P49018	411 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	PMT5	P52867	743 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	RTT102	P53330	157 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	MRP51	Q02950	344 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	PIR3	Q03180	325 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	URC2	Q04411	772 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	MGR3	Q04472	501 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	RRP9	Q06506	573 aa	Known RBP	4.1	□□□□□ -1.75
RPB7	YDR404C	SRL2	Q12020	392 aa		4.1	□□□□□ -1.75
RPB7	YDR404C	RPL15A	P05748	204 aa	Known RBP	4.09	□□□□□ -1.75
RPB7	YDR404C	SUR1	P33300	382 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	CSE2	P33308	149 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	SKN1	P33336	771 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	MYO3	P36006	1272 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	TVP38	P36164	337 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	YBR056W	P38081	501 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	MST28	P39552	234 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	MMF1	P40185	145 aa	Known RBP	4.09	□□□□□ -1.75
RPB7	YDR404C	RPR2	P40571	144 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	MPS2	P53159	387 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	NOP6	Q07623	225 aa	Known RBP	4.09	□□□□□ -1.75
RPB7	YDR404C	YPL199C	Q08954	240 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	AYT1	Q12226	474 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	YOR012W	Q12351	137 aa		4.09	□□□□□ -1.75
RPB7	YDR404C	RPL20A	P0CX23	172 aa	Known RBP	4.08	□□□□□ -1.76
RPB7	YDR404C	RPL20B	P0CX24	172 aa	Predicted RBP	4.08	□□□□□ -1.76
RPB7	YDR404C	RPL12A	P0CX53	165 aa	Known RBP	4.08	□□□□□ -1.76
RPB7	YDR404C	RPL12B	P0CX54	165 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	SAG1	P20840	650 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	PSO2	P30620	661 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	OSW5	P40219	148 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	LAM5	P43560	674 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	SSN8	P47821	323 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	PRM1	P53835	661 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	PRP3	Q03338	469 aa	Predicted RBP	4.08	□□□□□ -1.76
RPB7	YDR404C	ERP1	Q05359	219 aa	Known RBP	4.08	□□□□□ -1.76
RPB7	YDR404C	NCB2	Q92317	146 aa		4.08	□□□□□ -1.76
RPB7	YDR404C	ATR1	P13090	542 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	SLM5	P25345	492 aa	Known RBP	4.07	□□□□□ -1.76
RPB7	YDR404C	PUT3	P25502	979 aa	Predicted RBP	4.07	□□□□□ -1.76
RPB7	YDR404C	SRB2	P34162	210 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	MEP1	P40260	492 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	SIM1	P40472	476 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	LSB1	P53281	241 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	HST1	P53685	503 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	SMA2	Q04658	369 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	AAD15	Q08361	143 aa		4.07	□□□□□ -1.76
RPB7	YDR404C	RTC5	Q12108	567 aa	Known RBP	4.07	□□□□□ -1.76
RPB7	YDR404C	PDR18	P53756	1333 aa		4.06	□□□□□ -1.76
RPB7	YDR404C	HEM2	P05373	342 aa		4.06	□□□□□ -1.76
RPB7	YDR404C	SLY1	P22213	666 aa		4.06	□□□□□ -1.76
RPB7	YDR404C	RNA14	P25298	677 aa	Known RBP	4.06	□□□□□ -1.76
RPB7	YDR404C	RME1	P32338	300 aa	Known RBP	4.06	□□□□□ -1.76
RPB7	YDR404C	BUD2	P33314	1104 aa		4.06	□□□□□ -1.76
RPB7	YDR404C	MED6	P38782	295 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms