RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	RRP12	Q12754	1228 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	PEP4	P07267	405 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	YFR010W-A	P0C5N0	62 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YPK1	P12688	680 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	REV1	P12689	985 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	APA2	P22108	325 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YIH1	P25637	258 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	CDC12	P32468	407 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	SRB6	P32570	121 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	TGL1	P34163	548 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	PXA2	P34230	853 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	RIB1	P38066	345 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	RRG9	P40156	214 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	PIG2	P40187	538 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	GTT1	P40582	234 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	ERG10	P41338	398 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	DUG1	P43616	481 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	AIM14	P53109	570 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	ERV29	P53337	310 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	MKC7	P53379	596 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YPL113C	Q02961	396 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	UAF30	Q08747	228 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	MET32	Q12041	191 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YLR108C	Q12259	485 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	RDI1	Q12434	202 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	AFI1	Q99222	893 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	CDC23	P16522	626 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	MAG1	P22134	296 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	AGP1	P25376	633 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	SIP1	P32578	815 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YKL151C	P36059	337 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	MCR1	P36060	302 aa	Known RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	MRPL37	P36532	105 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YMC2	P38087	329 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YHR035W	P38769	630 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	SFB3	P38810	929 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	NSG1	P38837	291 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	NVJ1	P38881	321 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YJR141W	P47172	347 aa	Predicted RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	SIW14	P53965	281 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	MSS11	Q03825	758 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	SPO77	Q06134	477 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	SSK1	Q07084	712 aa		4.08	□□□□□ -1.76
UPC2	YDR213W	YTM1	Q12024	460 aa	Predicted RBP	4.08	□□□□□ -1.76
UPC2	YDR213W	UNG1	P12887	359 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
UPC2	YDR213W	AAC3	P18238	307 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	PGS1	P25578	521 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MRP20	P32387	263 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	ALY1	P36117	915 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	KAE1	P36132	386 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	RPF2	P36160	344 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	ASC1	P38011	319 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	BAP3	P41815	604 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	QRI7	P43122	407 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	CHA4	P43634	648 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	YJL043W	P47053	257 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MTR3	P48240	250 aa	Predicted RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	LYS5	P50113	272 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	SYF2	P53277	215 aa	Predicted RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	YNL034W	P53963	612 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MEH1	Q02205	184 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	NHP10	Q03435	203 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	PLB2	Q03674	706 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	SPG3	Q04398	127 aa	Predicted RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	TPO3	Q06451	622 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MHR1	Q06630	226 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MFG1	Q07684	458 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	AAD4	Q07747	329 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	RCL1	Q08096	367 aa	Predicted RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	CRT10	Q08226	957 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	NBA1	Q08229	501 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	TIR4	Q12218	487 aa	Predicted RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	CMC2	Q3E7A4	109 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	SIR1	P21691	654 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	AAT2	P23542	418 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	CPR3	P25719	182 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	YPT7	P32939	208 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	TMA19	P35691	167 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	DRE2	P36152	348 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	TVP38	P36164	337 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	MBA1	P38300	278 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	PRE3	P38624	215 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	ACA1	P39970	489 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	TED1	P40533	473 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	YJR111C	P47148	283 aa	Known RBP	4.07	□□□□□ -1.76
UPC2	YDR213W	RRN5	Q02983	363 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	VBA1	Q04301	562 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	YDR124W	Q04608	324 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	BLS1	Q06071	122 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	RRT8	Q08219	342 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	TMA17	Q12513	150 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	YJR112W-A	Q3E743	109 aa		4.07	□□□□□ -1.76
UPC2	YDR213W	NPR1	P22211	790 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	VMA5	P31412	392 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	AAR2	P32357	355 aa	Predicted RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	SEC17	P32602	292 aa		4.06	□□□□□ -1.76
UPC2	YDR213W	LHP1	P33399	275 aa	Known RBP	4.06	□□□□□ -1.76
UPC2	YDR213W	YNK1	P36010	153 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms