RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	ARC35	P53731	342 aa	Known RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	ERB1	Q04660	807 aa	Known RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	DIA2	Q08496	732 aa	Predicted RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	DCI1	Q08558	271 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	RPS21B	Q3E754	87 aa	Known RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	YHR214C-D	P0CX93	97 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	LHP1	P33399	275 aa	Known RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	TOD6	P34219	525 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	EXO84	P38261	753 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	ERP5	P38819	212 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	LEM3	P42838	414 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	YFR054C	P43622	192 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	PRY1	P47032	299 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	AAD10	P47182	288 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	SDC1	Q03323	175 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	YDR476C	Q03362	224 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	PLB2	Q03674	706 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	RAD30	Q04049	632 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	COS7	Q07788	383 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	RDR1	Q08904	546 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	CBS1	P14066	229 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	MER1	P16523	270 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	EXO70	P19658	623 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	CTR86	P25355	563 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	YPT7	P32939	208 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	YOR062C	P36025	268 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	ZTA1	P38230	334 aa	Known RBP	5.82	□□□□□ -1.48
CDC1	YDR182W	ATG14	P38270	344 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	ECM34	P38728	170 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	NSG1	P38837	291 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	XBP1	P40489	647 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	REE1	P40893	198 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	TRS85	P46944	698 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	MNN5	P46982	586 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	DCP2	P53550	970 aa	Known RBP	5.82	□□□□□ -1.48
CDC1	YDR182W	ALG12	P53730	551 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	HDA2	Q06629	674 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	GPN2	Q08726	347 aa	Predicted RBP	5.82	□□□□□ -1.48
CDC1	YDR182W	RCN2	Q12044	265 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	HER1	Q12276	1246 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	NPC2	Q12408	173 aa		5.82	□□□□□ -1.48
CDC1	YDR182W	LTV1	P34078	463 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	MDJ1	P35191	511 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	MIA40	P36046	403 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	YJL193W	P39542	402 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	YER010C	P40011	234 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	QDR1	P40475	563 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	HPM1	P40481	377 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	SMK1	P41808	388 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	CCT7	P42943	550 aa	Known RBP	5.81	□□□□□ -1.48
CDC1	YDR182W	COS6	P53344	381 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	MKC7	P53379	596 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	DBP6	P53734	629 aa	Known RBP	5.81	□□□□□ -1.48
CDC1	YDR182W	YML119W	Q03208	357 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	CTL1	Q03220	320 aa	Known RBP	5.81	□□□□□ -1.48
CDC1	YDR182W	FMN1	Q03778	218 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	YKU80	Q04437	629 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	SWM1	Q12379	170 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	YBL113C	Q7M4S9	792 aa		5.81	□□□□□ -1.48
CDC1	YDR182W	SEC16	P48415	2195 aa	Known RBP	5.8	□□□□□ -1.48
CDC1	YDR182W	SPS100	P13130	326 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	YCK1	P23291	538 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	DMC1	P25453	334 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	PBN1	P25580	416 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	ROT2	P38138	954 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	RCK1	P38622	512 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	ECM10	P39987	644 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	ARF3	P40994	183 aa	RIP-Chip data	5.8	□□□□□ -1.48	RIP-Chip
CDC1	YDR182W	SKP1	P52286	194 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	SUT1	P53032	299 aa	Known RBP	5.8	□□□□□ -1.48
CDC1	YDR182W	LSG1	P53145	640 aa	Known RBP	5.8	□□□□□ -1.48
CDC1	YDR182W	YNR040W	P53736	256 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	RAD33	Q04231	177 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	CRR1	Q05790	422 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	FMP40	Q08968	688 aa	Predicted RBP	5.8	□□□□□ -1.48
CDC1	YDR182W	SFG1	Q12507	346 aa		5.8	□□□□□ -1.48
CDC1	YDR182W	TPK2	P06245	380 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	PUT2	P07275	575 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	KSS1	P14681	368 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	THR1	P17423	357 aa	Known RBP	5.79	□□□□□ -1.48
CDC1	YDR182W	YAP1	P19880	650 aa	Known RBP	5.79	□□□□□ -1.48
CDC1	YDR182W	LOT5	P34234	306 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	RFC3	P38629	340 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	ZRG8	P40021	1076 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	LSM4	P40070	187 aa	Known RBP	5.79	□□□□□ -1.48
CDC1	YDR182W	IMA5	P40884	581 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	ECL1	P48235	211 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	TOS2	P50078	622 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	LYS5	P50113	272 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	YGR066C	P53242	292 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	YNR068C	P53754	272 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	RSN1	Q03516	953 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	YDR249C	Q03787	373 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	SNX41	Q04053	625 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	ARR1	Q06596	294 aa		5.79	□□□□□ -1.48
CDC1	YDR182W	RIB2	Q12362	591 aa	Known RBP	5.79	□□□□□ -1.48
CDC1	YDR182W	THP2	O13539	261 aa	Known RBP	5.78	□□□□□ -1.48
CDC1	YDR182W	MF(ALPHA)1	P01149	165 aa		5.78	□□□□□ -1.48
CDC1	YDR182W	RPP1A	P05318	106 aa	Predicted RBP	5.78	□□□□□ -1.48
CDC1	YDR182W	FPS1	P23900	669 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms