RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	SHQ1	P40486	507 aa	Predicted RBP	5.51	□□□□□ -1.53
TRP1	YDR007W	SSN8	P47821	323 aa		5.51	□□□□□ -1.53
TRP1	YDR007W	TDA7	P53882	636 aa	Predicted RBP	5.51	□□□□□ -1.53
TRP1	YDR007W	COX20	Q04935	205 aa		5.51	□□□□□ -1.53
TRP1	YDR007W	FMP42	Q04991	504 aa		5.51	□□□□□ -1.53
TRP1	YDR007W	TAF9	Q05027	157 aa		5.51	□□□□□ -1.53
TRP1	YDR007W	COX3	P00420	269 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	ADE4	P04046	510 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	ALG1	P16661	449 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	HNM1	P19807	563 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	SPS22	P25380	463 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	RPS5	P26783	225 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	APE2	P32454	952 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	ECM15	P35195	104 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	TPO5	P36029	618 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	RRP3	P38712	501 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	CTM1	P38818	585 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	LSM12	P38828	187 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	CHS6	P40955	746 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	YFH7	P43591	353 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	PRO2	P54885	456 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	RVB1	Q03940	463 aa	Known RBP	5.5	□□□□□ -1.53
TRP1	YDR007W	MRPL1	Q04599	285 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	YDL114W	Q07530	308 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	YFH1	Q07540	174 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	PSY3	Q12318	242 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	NCB2	Q92317	146 aa		5.5	□□□□□ -1.53
TRP1	YDR007W	IPP1	P00817	287 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	RPL24A	P04449	155 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	MATALPHA2	P0CY08	210 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	HMLALPHA2	P0CY09	210 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	POL30	P15873	258 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	MER1	P16523	270 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	MDM10	P18409	493 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	CRM1	P30822	1084 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	FRE1	P32791	686 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	AST1	P35183	429 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	SLX1	P38324	304 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	RRP4	P38792	359 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	YIR016W	P40572	265 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	PHO86	P46956	311 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	MDE1	P47095	244 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	NUP84	P52891	726 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	PCP1	P53259	346 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	YDR415C	Q04033	374 aa	Predicted RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	URC2	Q04411	772 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	BNA5	Q05979	453 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	YEH2	Q07950	538 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	RPN8	Q08723	338 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	REX3	Q12090	404 aa		5.49	□□□□□ -1.53
TRP1	YDR007W	RTC5	Q12108	567 aa	Known RBP	5.49	□□□□□ -1.53
TRP1	YDR007W	HIS4	P00815	799 aa	Known RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	VPS3	P23643	1011 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	MEI4	P29467	408 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	PTR2	P32901	601 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	NPT1	P39683	429 aa	Known RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	NAS2	P40555	220 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	TRF5	P48561	642 aa	Known RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	YMR254C	Q04838	102 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	COA4	Q05809	96 aa		5.48	□□□□□ -1.53
TRP1	YDR007W	MRPL51	Q06090	140 aa	Predicted RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	PML1	Q07930	204 aa	Predicted RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	SNU23	Q12368	194 aa	Predicted RBP	5.48	□□□□□ -1.53
TRP1	YDR007W	YRF1-2	P40105	1681 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	PHO91	P27514	894 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	ZIP1	P31111	875 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	HXT1	P32465	570 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	ECM25	P32525	599 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	RPT5	P33297	434 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	TIF5	P38431	405 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	YHR218W	P38899	603 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	RCY1	P39531	840 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	AST2	P39945	430 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	ISC1	P40015	477 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	GAT2	P40209	560 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	YIL089W	P40500	205 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	AZF1	P41696	914 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	DIM1	P41819	318 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	YIP5	P53108	310 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	ROG1	P53118	685 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	CUE3	P53137	624 aa	Known RBP	5.47	□□□□□ -1.53
TRP1	YDR007W	CGR1	P53188	120 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	AQR1	P53943	586 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	SLT2	Q00772	484 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	IRC15	Q02733	499 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	YDR541C	Q03049	344 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	ABZ2	Q03266	374 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	URH1	Q04179	340 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	YMR087W	Q04299	284 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	DXO1	Q06349	442 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	UBX3	Q12229	455 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	YBL111C	Q3E7Y5	667 aa		5.47	□□□□□ -1.53
TRP1	YDR007W	YAK1	P14680	807 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	STF2	P16965	84 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	PTP1	P25044	335 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	FAA1	P30624	700 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	ERG1	P32476	496 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	NAT2	P37293	288 aa		5.46	□□□□□ -1.54
TRP1	YDR007W	RFS1	P38234	210 aa	Known RBP	5.46	□□□□□ -1.54
TRP1	YDR007W	RRF1	P38771	230 aa		5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms