RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C YOR012WQ12351 137 aa3.39□□□□□ -1.87
RPN4YDL020C THR4P16120 514 aaKnown RBP3.38□□□□□ -1.87
RPN4YDL020C DBR1P24309 405 aaKnown RBP3.38□□□□□ -1.87
RPN4YDL020C MST27P53176 234 aa3.38□□□□□ -1.87
RPN4YDL020C PRM1P53835 661 aa3.38□□□□□ -1.87
RPN4YDL020C ADA2Q02336 434 aa3.38□□□□□ -1.87
RPN4YDL020C XRN1P22147 1528 aaKnown RBP3.38□□□□□ -1.87
RPN4YDL020C MAS1P10507 462 aa3.38□□□□□ -1.87
RPN4YDL020C SAG1P20840 650 aa3.38□□□□□ -1.87
RPN4YDL020C MRPL8P22353 238 aa3.38□□□□□ -1.87
RPN4YDL020C AIM33Q04516 312 aa3.38□□□□□ -1.87
RPN4YDL020C YMR310CQ04867 317 aaPredicted RBP3.38□□□□□ -1.87
RPN4YDL020C HRT3Q12347 344 aa3.38□□□□□ -1.87
RPN4YDL020C IZH2Q12442 317 aa3.38□□□□□ -1.87
RPN4YDL020C HTZ1Q12692 134 aaKnown RBP3.38□□□□□ -1.87
RPN4YDL020C YOR338WQ99326 363 aa3.38□□□□□ -1.87
RPN4YDL020C FSH3Q99369 266 aa3.38□□□□□ -1.87
RPN4YDL020C HIR3P47171 1648 aa3.37□□□□□ -1.87
RPN4YDL020C RPB5P20434 215 aa3.37□□□□□ -1.87
RPN4YDL020C ISY1P21374 235 aaPredicted RBP3.37□□□□□ -1.87
RPN4YDL020C EFB1P32471 206 aaKnown RBP3.37□□□□□ -1.87
RPN4YDL020C LCP5P40079 357 aaPredicted RBP3.37□□□□□ -1.87
RPN4YDL020C SEC27P41811 889 aaKnown RBP3.37□□□□□ -1.87
RPN4YDL020C YFR057WP43625 151 aa3.37□□□□□ -1.87
RPN4YDL020C YPR091CQ06833 770 aa3.37□□□□□ -1.87
RPN4YDL020C JID1Q12350 301 aa3.37□□□□□ -1.87
RPN4YDL020C MEX67Q99257 599 aaKnown RBP3.37□□□□□ -1.87
RPN4YDL020C SIN3P22579 1536 aa3.36□□□□□ -1.87
RPN4YDL020C MAS2P11914 482 aa3.36□□□□□ -1.87
RPN4YDL020C HMX1P32339 317 aa3.36□□□□□ -1.87
RPN4YDL020C MRPL10P36520 322 aa3.36□□□□□ -1.87
RPN4YDL020C ECM8P38246 354 aa3.36□□□□□ -1.87
RPN4YDL020C YHR131CP38835 850 aa3.36□□□□□ -1.87
RPN4YDL020C SEC9P40357 651 aa3.36□□□□□ -1.87
RPN4YDL020C SHE4P51534 789 aa3.36□□□□□ -1.87
RPN4YDL020C RRB1Q04225 511 aaKnown RBP3.36□□□□□ -1.87
RPN4YDL020C YDL114WQ07530 308 aa3.36□□□□□ -1.87
RPN4YDL020C SHS1Q07657 551 aa3.36□□□□□ -1.87
RPN4YDL020C GAT3Q07928 141 aa3.36□□□□□ -1.87
RPN4YDL020C FCY22Q12119 530 aa3.36□□□□□ -1.87
RPN4YDL020C PCL9Q12477 304 aa3.36□□□□□ -1.87
RPN4YDL020C AIM45Q12480 344 aaKnown RBP3.36□□□□□ -1.87
RPN4YDL020C RPS16AP0CX51 143 aaKnown RBP3.35□□□□□ -1.87
RPN4YDL020C RPS16BP0CX52 143 aaKnown RBP3.35□□□□□ -1.87
RPN4YDL020C GRR1P24814 1151 aa3.35□□□□□ -1.87
RPN4YDL020C RVS161P25343 265 aaKnown RBP3.35□□□□□ -1.87
RPN4YDL020C VAM7P32912 316 aa3.35□□□□□ -1.87
RPN4YDL020C POP2P39008 433 aa3.35□□□□□ -1.87
RPN4YDL020C EGT2P42835 1041 aa3.35□□□□□ -1.87
RPN4YDL020C BIR1P47134 954 aa3.35□□□□□ -1.87
RPN4YDL020C HST1P53685 503 aa3.35□□□□□ -1.87
RPN4YDL020C CMS1Q07897 291 aaKnown RBP3.35□□□□□ -1.87
RPN4YDL020C PLP2Q12017 286 aa3.35□□□□□ -1.87
RPN4YDL020C GLE1Q12315 538 aa3.35□□□□□ -1.87
RPN4YDL020C REV3P14284 1504 aa3.34□□□□□ -1.87
RPN4YDL020C YEL045CP32616 141 aa3.34□□□□□ -1.87
RPN4YDL020C SPO23P33757 523 aa3.34□□□□□ -1.87
RPN4YDL020C AIM10P39965 576 aaKnown RBP3.34□□□□□ -1.87
RPN4YDL020C BNS1P50084 137 aa3.34□□□□□ -1.87
RPN4YDL020C CLD1P53264 445 aa3.34□□□□□ -1.87
RPN4YDL020C CRH1P53301 507 aa3.34□□□□□ -1.87
RPN4YDL020C SPH1Q06160 661 aa3.34□□□□□ -1.87
RPN4YDL020C THO2P53552 1597 aaKnown RBP3.34□□□□□ -1.87
RPN4YDL020C SSK2P53599 1579 aa3.34□□□□□ -1.88
RPN4YDL020C FUN26P31381 517 aa3.34□□□□□ -1.88
RPN4YDL020C SSE1P32589 693 aaKnown RBP3.34□□□□□ -1.88
RPN4YDL020C YHR122WP38829 231 aa3.34□□□□□ -1.88
RPN4YDL020C PTI1P39927 425 aaPredicted RBP3.34□□□□□ -1.88
RPN4YDL020C SMP3Q04174 516 aa3.34□□□□□ -1.88
RPN4YDL020C PAL1Q05518 499 aaKnown RBP3.34□□□□□ -1.88
RPN4YDL020C ARR1Q06596 294 aa3.34□□□□□ -1.88
RPN4YDL020C MFG1Q07684 458 aa3.34□□□□□ -1.88
RPN4YDL020C RBD2Q12270 262 aa3.34□□□□□ -1.88
RPN4YDL020C STF1P01098 86 aa3.33□□□□□ -1.88
RPN4YDL020C CKI1P20485 582 aa3.33□□□□□ -1.88
RPN4YDL020C HXT2P23585 541 aa3.33□□□□□ -1.88
RPN4YDL020C PRR1P28708 518 aa3.33□□□□□ -1.88
RPN4YDL020C RTC2P38279 296 aa3.33□□□□□ -1.88
RPN4YDL020C YNL208WP40159 199 aaKnown RBP3.33□□□□□ -1.88
RPN4YDL020C ATG18P43601 500 aa3.33□□□□□ -1.88
RPN4YDL020C YLH47Q06493 454 aa3.33□□□□□ -1.88
RPN4YDL020C WTM1Q12363 437 aaKnown RBP3.33□□□□□ -1.88
RPN4YDL020C YDL199CQ12407 687 aa3.33□□□□□ -1.88
RPN4YDL020C YOX1P34161 385 aa3.32□□□□□ -1.88
RPN4YDL020C ANR2P36090 516 aaPredicted RBP3.32□□□□□ -1.88
RPN4YDL020C MIG3P39943 394 aa3.32□□□□□ -1.88
RPN4YDL020C CTK3P46963 296 aaPredicted RBP3.32□□□□□ -1.88
RPN4YDL020C YHC3P47040 408 aa3.32□□□□□ -1.88
RPN4YDL020C SDT1P53078 280 aa3.32□□□□□ -1.88
RPN4YDL020C REX3Q12090 404 aa3.32□□□□□ -1.88
RPN4YDL020C NAG1Q8TGN9 163 aa3.32□□□□□ -1.88
RPN4YDL020C UFD4P33202 1483 aa3.32□□□□□ -1.88
RPN4YDL020C FAR1P21268 830 aa3.31□□□□□ -1.88
RPN4YDL020C AAT2P23542 418 aaKnown RBP3.31□□□□□ -1.88
RPN4YDL020C HXT1P32465 570 aa3.31□□□□□ -1.88
RPN4YDL020C SRB2P34162 210 aa3.31□□□□□ -1.88
RPN4YDL020C YHR182WP38870 785 aa3.31□□□□□ -1.88
RPN4YDL020C ALP1P38971 573 aa3.31□□□□□ -1.88
RPN4YDL020C OXA1P39952 402 aa3.31□□□□□ -1.88
RPN4YDL020C UTP18P40362 594 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms