RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeast

Gene RER1, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RER1	YCL001W	RSM28	Q03430	361 aa		4.2	□□□□□ -1.74
RER1	YCL001W	RRB1	Q04225	511 aa	Known RBP	4.2	□□□□□ -1.74
RER1	YCL001W	POL2	P21951	2222 aa	Known RBP	4.19	□□□□□ -1.74
RER1	YCL001W	RIP1	P08067	215 aa		4.19	□□□□□ -1.74
RER1	YCL001W	RSR1	P13856	272 aa		4.19	□□□□□ -1.74
RER1	YCL001W	FUR1	P18562	216 aa	Known RBP	4.19	□□□□□ -1.74
RER1	YCL001W	PRP2	P20095	876 aa	Predicted RBP	4.19	□□□□□ -1.74
RER1	YCL001W	CLB2	P24869	491 aa		4.19	□□□□□ -1.74
RER1	YCL001W	CPR3	P25719	182 aa		4.19	□□□□□ -1.74
RER1	YCL001W	SOL2	P37262	315 aa		4.19	□□□□□ -1.74
RER1	YCL001W	TRM7	P38238	310 aa	Known RBP	4.19	□□□□□ -1.74
RER1	YCL001W	SLZ1	P40167	298 aa		4.19	□□□□□ -1.74
RER1	YCL001W	MIC19	P43594	170 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YDR415C	Q04033	374 aa	Predicted RBP	4.19	□□□□□ -1.74
RER1	YCL001W	TRM12	Q04235	462 aa		4.19	□□□□□ -1.74
RER1	YCL001W	BUD22	Q04347	519 aa	Known RBP	4.19	□□□□□ -1.74
RER1	YCL001W	RRN11	Q04712	507 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YLR177W	Q06251	628 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YET3	Q07451	203 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YDR056C	Q12025	205 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YMR030W-A	Q3E760	96 aa		4.19	□□□□□ -1.74
RER1	YCL001W	YBR085C-A	O43137	85 aa		4.18	□□□□□ -1.74
RER1	YCL001W	RED1	P14291	827 aa		4.18	□□□□□ -1.74
RER1	YCL001W	PDA1	P16387	420 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	DAL82	P21705	255 aa		4.18	□□□□□ -1.74
RER1	YCL001W	SAC1	P32368	623 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	CYM1	P32898	989 aa		4.18	□□□□□ -1.74
RER1	YCL001W	SKN1	P33336	771 aa		4.18	□□□□□ -1.74
RER1	YCL001W	MUD2	P36084	527 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	KRE9	P39005	276 aa		4.18	□□□□□ -1.74
RER1	YCL001W	ECM10	P39987	644 aa		4.18	□□□□□ -1.74
RER1	YCL001W	LSM5	P40089	93 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	SEC24	P40482	926 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	YFR020W	P43600	232 aa		4.18	□□□□□ -1.74
RER1	YCL001W	ARC1	P46672	376 aa	Known RBP	4.18	□□□□□ -1.74
RER1	YCL001W	CTK2	P46962	323 aa		4.18	□□□□□ -1.74
RER1	YCL001W	RCF2	P53721	224 aa		4.18	□□□□□ -1.74
RER1	YCL001W	VHS1	Q03785	461 aa		4.18	□□□□□ -1.74
RER1	YCL001W	SMA2	Q04658	369 aa		4.18	□□□□□ -1.74
RER1	YCL001W	BCH1	Q05029	724 aa		4.18	□□□□□ -1.74
RER1	YCL001W	ENT4	Q07872	247 aa		4.18	□□□□□ -1.74
RER1	YCL001W	RSA1	Q08932	381 aa		4.18	□□□□□ -1.74
RER1	YCL001W	YDR262W	Q12331	272 aa		4.18	□□□□□ -1.74
RER1	YCL001W	RGS2	Q99188	309 aa		4.18	□□□□□ -1.74
RER1	YCL001W	SEC53	P07283	254 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	SSC1	P0CS90	654 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	SEC14	P24280	304 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	CLB1	P24868	471 aa		4.17	□□□□□ -1.74
RER1	YCL001W	GFD2	P25370	566 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	ATP11	P32453	318 aa		4.17	□□□□□ -1.74
RER1	YCL001W	MGM101	P32787	269 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	SKT5	P34226	696 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YKL100C	P34248	587 aa		4.17	□□□□□ -1.74
RER1	YCL001W	TAF14	P35189	244 aa		4.17	□□□□□ -1.74
RER1	YCL001W	EFM1	P38732	585 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YHR127W	P38833	243 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	YHB1	P39676	399 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	NPT1	P39683	429 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	YEL068C	P39977	110 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YER034W	P40022	185 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	UTP18	P40362	594 aa	Predicted RBP	4.17	□□□□□ -1.74
RER1	YCL001W	URB2	P47108	1174 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YJR149W	P47177	404 aa		4.17	□□□□□ -1.74
RER1	YCL001W	AAD10	P47182	288 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YGR015C	P53208	328 aa		4.17	□□□□□ -1.74
RER1	YCL001W	CLD1	P53264	445 aa		4.17	□□□□□ -1.74
RER1	YCL001W	SHY1	P53266	389 aa		4.17	□□□□□ -1.74
RER1	YCL001W	INN1	P53901	409 aa		4.17	□□□□□ -1.74
RER1	YCL001W	NHP10	Q03435	203 aa		4.17	□□□□□ -1.74
RER1	YCL001W	GOT1	Q03554	138 aa		4.17	□□□□□ -1.74
RER1	YCL001W	TAF11	Q04226	346 aa		4.17	□□□□□ -1.74
RER1	YCL001W	DIC1	Q06143	298 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YLR030W	Q07967	263 aa		4.17	□□□□□ -1.74
RER1	YCL001W	YOL107W	Q12239	342 aa		4.17	□□□□□ -1.74
RER1	YCL001W	RRP42	Q12277	265 aa	Predicted RBP	4.17	□□□□□ -1.74
RER1	YCL001W	PST1	Q12355	444 aa		4.17	□□□□□ -1.74
RER1	YCL001W	RRP12	Q12754	1228 aa	Known RBP	4.17	□□□□□ -1.74
RER1	YCL001W	HXK2	P04807	486 aa	Known RBP	4.16	□□□□□ -1.74
RER1	YCL001W	STE3	P06783	470 aa		4.16	□□□□□ -1.74
RER1	YCL001W	GAL7	P08431	366 aa		4.16	□□□□□ -1.74
RER1	YCL001W	RAP1	P11938	827 aa		4.16	□□□□□ -1.74
RER1	YCL001W	RPB4	P20433	221 aa	Predicted RBP	4.16	□□□□□ -1.74
RER1	YCL001W	BUB3	P26449	341 aa		4.16	□□□□□ -1.74
RER1	YCL001W	PHA2	P32452	334 aa		4.16	□□□□□ -1.74
RER1	YCL001W	PTM1	P32857	523 aa		4.16	□□□□□ -1.74
RER1	YCL001W	GGC1	P38988	300 aa		4.16	□□□□□ -1.74
RER1	YCL001W	LYS1	P38998	373 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
RER1	YCL001W	NDE1	P40215	560 aa		4.16	□□□□□ -1.74
RER1	YCL001W	TIS11	P47977	285 aa		4.16	□□□□□ -1.74
RER1	YCL001W	MDM34	P53083	459 aa		4.16	□□□□□ -1.74
RER1	YCL001W	YGR250C	P53316	781 aa	Known RBP	4.16	□□□□□ -1.74
RER1	YCL001W	BIO4	P53630	237 aa		4.16	□□□□□ -1.74
RER1	YCL001W	IST1	P53843	298 aa	Predicted RBP	4.16	□□□□□ -1.74
RER1	YCL001W	HPT1	Q04178	221 aa	Known RBP	4.16	□□□□□ -1.74
RER1	YCL001W	STE23	Q06010	1027 aa		4.16	□□□□□ -1.74
RER1	YCL001W	YOL019W	Q08157	551 aa		4.16	□□□□□ -1.74
RER1	YCL001W	BSC6	Q08280	497 aa		4.16	□□□□□ -1.74
RER1	YCL001W	LEU9	Q12166	604 aa	Known RBP	4.16	□□□□□ -1.74
RER1	YCL001W	MDY2	Q12285	212 aa		4.16	□□□□□ -1.74
RER1	YCL001W	CSF1	Q12150	2958 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms