RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C SIA1Q12212 622 aa5.81□□□□□ -1.48
RGD1YBR260C MDM12Q92328 271 aa5.81□□□□□ -1.48
RGD1YBR260C HBN1Q96VH4 193 aa5.81□□□□□ -1.48
RGD1YBR260C IZH4Q99393 312 aa5.81□□□□□ -1.48
RGD1YBR260C RPP1BP10622 106 aaKnown RBP5.8□□□□□ -1.48
RGD1YBR260C CAF20P12962 161 aaKnown RBP5.8□□□□□ -1.48
RGD1YBR260C PET9P18239 318 aaKnown RBP5.8□□□□□ -1.48
RGD1YBR260C YCR061WP25639 631 aa5.8□□□□□ -1.48
RGD1YBR260C BUB3P26449 341 aa5.8□□□□□ -1.48
RGD1YBR260C MRPL9P31334 269 aa5.8□□□□□ -1.48
RGD1YBR260C MSN4P33749 630 aa5.8□□□□□ -1.48
RGD1YBR260C YKL162CP36052 402 aa5.8□□□□□ -1.48
RGD1YBR260C TAT1P38085 619 aa5.8□□□□□ -1.48
RGD1YBR260C ATG8P38182 117 aaRIP-Chip data5.8□□□□□ -1.48not detected
RGD1YBR260C TCM62P38228 572 aaKnown RBP5.8□□□□□ -1.48
RGD1YBR260C YEL025CP39991 1188 aa5.8□□□□□ -1.48
RGD1YBR260C MPM1P40364 252 aa5.8□□□□□ -1.48
RGD1YBR260C PKP1P40530 394 aa5.8□□□□□ -1.48
RGD1YBR260C YMR265CQ03508 461 aaKnown RBP5.8□□□□□ -1.48
RGD1YBR260C MSS11Q03825 758 aa5.8□□□□□ -1.48
RGD1YBR260C YDL121CQ07541 149 aa5.8□□□□□ -1.48
RGD1YBR260C PLB3Q08108 686 aa5.8□□□□□ -1.48
RGD1YBR260C THP1Q08231 455 aa5.8□□□□□ -1.48
RGD1YBR260C AKR2Q12013 749 aa5.8□□□□□ -1.48
RGD1YBR260C AFI1Q99222 893 aa5.8□□□□□ -1.48
RGD1YBR260C CDC28P00546 298 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C SEC12P11655 471 aa5.79□□□□□ -1.48
RGD1YBR260C MIR1P23641 311 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C MRP20P32387 263 aa5.79□□□□□ -1.48
RGD1YBR260C MAL32P38158 584 aa5.79□□□□□ -1.48
RGD1YBR260C BIT2P38346 545 aa5.79□□□□□ -1.48
RGD1YBR260C SRP68P38687 599 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C PTC7P38797 343 aa5.79□□□□□ -1.48
RGD1YBR260C NPP2P39997 493 aa5.79□□□□□ -1.48
RGD1YBR260C GDS1P41913 522 aa5.79□□□□□ -1.48
RGD1YBR260C PAM16P42949 149 aa5.79□□□□□ -1.48
RGD1YBR260C NIT2P47016 307 aa5.79□□□□□ -1.48
RGD1YBR260C VPS73P53142 486 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C SWC4P53201 476 aa5.79□□□□□ -1.48
RGD1YBR260C MAL12P53341 584 aa5.79□□□□□ -1.48
RGD1YBR260C VBA1Q04301 562 aa5.79□□□□□ -1.48
RGD1YBR260C SKG3Q06315 1026 aa5.79□□□□□ -1.48
RGD1YBR260C YPR084WQ06821 456 aa5.79□□□□□ -1.48
RGD1YBR260C PML1Q07930 204 aaPredicted RBP5.79□□□□□ -1.48
RGD1YBR260C RPS9AO13516 197 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C ADE4P04046 510 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C MATALPHA1P0CY06 175 aa5.79□□□□□ -1.48
RGD1YBR260C HMLALPHA1P0CY07 175 aa5.79□□□□□ -1.48
RGD1YBR260C PUT4P15380 627 aa5.79□□□□□ -1.48
RGD1YBR260C YPK2P18961 677 aa5.79□□□□□ -1.48
RGD1YBR260C SFC1P33303 322 aa5.79□□□□□ -1.48
RGD1YBR260C YHR054CP38780 354 aa5.79□□□□□ -1.48
RGD1YBR260C RGI2P40188 164 aa5.79□□□□□ -1.48
RGD1YBR260C RFC4P40339 323 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C MND2P40577 368 aa5.79□□□□□ -1.48
RGD1YBR260C PRM10P42946 383 aa5.79□□□□□ -1.48
RGD1YBR260C HMS2P47175 358 aa5.79□□□□□ -1.48
RGD1YBR260C PHO23P50947 330 aa5.79□□□□□ -1.48
RGD1YBR260C GND2P53319 492 aa5.79□□□□□ -1.48
RGD1YBR260C YMR130WQ04223 302 aa5.79□□□□□ -1.48
RGD1YBR260C IRC3Q06683 689 aa5.79□□□□□ -1.48
RGD1YBR260C SSK1Q07084 712 aa5.79□□□□□ -1.48
RGD1YBR260C NRT1Q08485 598 aa5.79□□□□□ -1.48
RGD1YBR260C MCA1Q08601 432 aa5.79□□□□□ -1.48
RGD1YBR260C NUS1Q12063 375 aa5.79□□□□□ -1.48
RGD1YBR260C YPL245WQ12179 454 aaKnown RBP5.79□□□□□ -1.48
RGD1YBR260C SNF8Q12483 233 aa5.79□□□□□ -1.48
RGD1YBR260C CTF3Q12748 733 aa5.79□□□□□ -1.48
RGD1YBR260C TRP4P07285 380 aaPredicted RBP5.78□□□□□ -1.48
RGD1YBR260C HOM3P10869 527 aa5.78□□□□□ -1.48
RGD1YBR260C NAM2P11325 894 aa5.78□□□□□ -1.48
RGD1YBR260C STE50P25344 346 aa5.78□□□□□ -1.48
RGD1YBR260C IDH1P28834 360 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
RGD1YBR260C SEF1P34228 1148 aa5.78□□□□□ -1.48
RGD1YBR260C OAR1P35731 278 aa5.78□□□□□ -1.48
RGD1YBR260C ASC1P38011 319 aaKnown RBP5.78□□□□□ -1.48
RGD1YBR260C DMA1P38823 416 aa5.78□□□□□ -1.48
RGD1YBR260C AIM18P38884 321 aa5.78□□□□□ -1.48
RGD1YBR260C ISC1P40015 477 aaKnown RBP5.78□□□□□ -1.48
RGD1YBR260C IDP2P41939 412 aa5.78□□□□□ -1.48
RGD1YBR260C AGX1P43567 385 aa5.78□□□□□ -1.48
RGD1YBR260C PMT4P46971 762 aa5.78□□□□□ -1.48
RGD1YBR260C YJR111CP47148 283 aaKnown RBP5.78□□□□□ -1.48
RGD1YBR260C BUD9P53226 547 aa5.78□□□□□ -1.48
RGD1YBR260C ART5P53244 586 aaKnown RBP5.78□□□□□ -1.48
RGD1YBR260C YGR283CP53336 341 aaPredicted RBP5.78□□□□□ -1.48
RGD1YBR260C YNL146WP53906 100 aa5.78□□□□□ -1.48
RGD1YBR260C RHO4Q00246 291 aa5.78□□□□□ -1.48
RGD1YBR260C KIN4Q01919 800 aa5.78□□□□□ -1.48
RGD1YBR260C EAR1Q03212 550 aa5.78□□□□□ -1.48
RGD1YBR260C JIP4Q03361 876 aa5.78□□□□□ -1.48
RGD1YBR260C MRPL35Q06678 367 aa5.78□□□□□ -1.48
RGD1YBR260C HBT1Q07653 1046 aaKnown RBP5.78□□□□□ -1.48
RGD1YBR260C GPB1Q08886 897 aa5.78□□□□□ -1.48
RGD1YBR260C ERP4Q12450 207 aa5.78□□□□□ -1.48
RGD1YBR260C DFR1P07807 211 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
RGD1YBR260C RPS4AP0CX35 261 aaKnown RBP5.77□□□□□ -1.49
RGD1YBR260C RPS4BP0CX36 261 aaKnown RBP5.77□□□□□ -1.49
RGD1YBR260C SNF6P18888 332 aa5.77□□□□□ -1.49
RGD1YBR260C COX11P19516 300 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms