RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YEL009C-AA0A023PZF2 135 aa6.47□□□□□ -1.37
TDP1YBR223C GRX2P17695 143 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C YCK1P23291 538 aa6.47□□□□□ -1.37
TDP1YBR223C TCD2P36101 447 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C RPS20P38701 121 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C QRI7P43122 407 aa6.47□□□□□ -1.37
TDP1YBR223C MDV1P47025 714 aa6.47□□□□□ -1.37
TDP1YBR223C RBG2P53295 368 aaKnown RBP6.47□□□□□ -1.37
TDP1YBR223C RHO4Q00246 291 aa6.47□□□□□ -1.37
TDP1YBR223C YMR310CQ04867 317 aaPredicted RBP6.47□□□□□ -1.37
TDP1YBR223C BOP2Q06150 570 aa6.47□□□□□ -1.37
TDP1YBR223C FRE5Q08908 694 aa6.47□□□□□ -1.37
TDP1YBR223C RTT10Q08924 1013 aa6.47□□□□□ -1.37
TDP1YBR223C RKM5Q12367 367 aa6.47□□□□□ -1.37
TDP1YBR223C LAG2Q92325 660 aa6.47□□□□□ -1.37
TDP1YBR223C MSB2P32334 1306 aa6.46□□□□□ -1.37
TDP1YBR223C SLH1P53327 1967 aaKnown RBP6.46□□□□□ -1.38
TDP1YBR223C MDM35O60200 86 aa6.46□□□□□ -1.38
TDP1YBR223C RAS1P01119 309 aa6.46□□□□□ -1.38
TDP1YBR223C YOL163WP0CF20 169 aa6.46□□□□□ -1.38
TDP1YBR223C STF2P16965 84 aa6.46□□□□□ -1.38
TDP1YBR223C HSP30P25619 332 aa6.46□□□□□ -1.38
TDP1YBR223C ERG1P32476 496 aaKnown RBP6.46□□□□□ -1.38
TDP1YBR223C SUR1P33300 382 aa6.46□□□□□ -1.38
TDP1YBR223C TOD6P34219 525 aa6.46□□□□□ -1.38
TDP1YBR223C YBR137WP38276 179 aa6.46□□□□□ -1.38
TDP1YBR223C MNT4P53745 580 aa6.46□□□□□ -1.38
TDP1YBR223C TDA1Q03533 586 aa6.46□□□□□ -1.38
TDP1YBR223C ELP6Q04868 273 aa6.46□□□□□ -1.38
TDP1YBR223C OPI10Q08202 246 aa6.46□□□□□ -1.38
TDP1YBR223C SKI7Q08491 747 aaPredicted RBP6.46□□□□□ -1.38
TDP1YBR223C BBP1Q12365 385 aa6.46□□□□□ -1.38
TDP1YBR223C RTN2Q12443 393 aa6.46□□□□□ -1.38
TDP1YBR223C PCL9Q12477 304 aa6.46□□□□□ -1.38
TDP1YBR223C APN1P22936 367 aa6.45□□□□□ -1.38
TDP1YBR223C NAR1P23503 491 aaKnown RBP6.45□□□□□ -1.38
TDP1YBR223C ERG9P29704 444 aa6.45□□□□□ -1.38
TDP1YBR223C PPQ1P32945 549 aa6.45□□□□□ -1.38
TDP1YBR223C ARC19P33204 171 aaKnown RBP6.45□□□□□ -1.38
TDP1YBR223C YKL151CP36059 337 aa6.45□□□□□ -1.38
TDP1YBR223C SRO77P38163 1010 aa6.45□□□□□ -1.38
TDP1YBR223C SHE1P38200 338 aa6.45□□□□□ -1.38
TDP1YBR223C HXT5P38695 592 aa6.45□□□□□ -1.38
TDP1YBR223C MLH1P38920 769 aa6.45□□□□□ -1.38
TDP1YBR223C RTT105P40063 208 aa6.45□□□□□ -1.38
TDP1YBR223C NEO1P40527 1151 aa6.45□□□□□ -1.38
TDP1YBR223C PFS2P42841 465 aaKnown RBP6.45□□□□□ -1.38
TDP1YBR223C BAT2P47176 376 aaKnown RBP6.45□□□□□ -1.38
TDP1YBR223C SPT20P50875 604 aa6.45□□□□□ -1.38
TDP1YBR223C TPN1P53099 579 aa6.45□□□□□ -1.38
TDP1YBR223C SNO2P53823 222 aa6.45□□□□□ -1.38
TDP1YBR223C RSF1Q05043 376 aa6.45□□□□□ -1.38
TDP1YBR223C PUS9Q12069 462 aa6.45□□□□□ -1.38
TDP1YBR223C BSC1Q12140 328 aa6.45□□□□□ -1.38
TDP1YBR223C AHC1Q12433 566 aa6.45□□□□□ -1.38
TDP1YBR223C SFG1Q12507 346 aa6.45□□□□□ -1.38
TDP1YBR223C YLR111WQ12528 110 aa6.45□□□□□ -1.38
TDP1YBR223C YDL007C-AQ2V2Q0 85 aa6.45□□□□□ -1.38
TDP1YBR223C SIR2P06700 562 aa6.44□□□□□ -1.38
TDP1YBR223C ATG22P25568 528 aa6.44□□□□□ -1.38
TDP1YBR223C RNP1P32385 249 aa6.44□□□□□ -1.38
TDP1YBR223C SFC1P33303 322 aa6.44□□□□□ -1.38
TDP1YBR223C RRP3P38712 501 aaKnown RBP6.44□□□□□ -1.38
TDP1YBR223C MNN5P46982 586 aa6.44□□□□□ -1.38
TDP1YBR223C MAL11P53048 616 aa6.44□□□□□ -1.38
TDP1YBR223C CDH1P53197 566 aa6.44□□□□□ -1.38
TDP1YBR223C YKR011CQ02209 353 aa6.44□□□□□ -1.38
TDP1YBR223C ELP4Q02884 456 aaKnown RBP6.44□□□□□ -1.38
TDP1YBR223C EAR1Q03212 550 aa6.44□□□□□ -1.38
TDP1YBR223C OST6Q03723 332 aa6.44□□□□□ -1.38
TDP1YBR223C NAT4Q04751 285 aa6.44□□□□□ -1.38
TDP1YBR223C YDR344CQ05510 147 aa6.44□□□□□ -1.38
TDP1YBR223C FDH1Q08911 376 aa6.44□□□□□ -1.38
TDP1YBR223C PFA4Q12006 378 aa6.44□□□□□ -1.38
TDP1YBR223C MDM32Q12171 622 aa6.44□□□□□ -1.38
TDP1YBR223C TY1A-NL1Q12391 440 aaKnown RBP6.44□□□□□ -1.38
TDP1YBR223C YPR015CQ12531 247 aa6.44□□□□□ -1.38
TDP1YBR223C YKL033W-AQ86ZR7 236 aa6.44□□□□□ -1.38
TDP1YBR223C MPD2Q99316 277 aa6.44□□□□□ -1.38
TDP1YBR223C MOD5P07884 428 aa6.43□□□□□ -1.38
TDP1YBR223C AGP1P25376 633 aa6.43□□□□□ -1.38
TDP1YBR223C HOM6P31116 359 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C SSH4P32343 579 aa6.43□□□□□ -1.38
TDP1YBR223C HYM1P32464 399 aa6.43□□□□□ -1.38
TDP1YBR223C HIS7P33734 552 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C DOA1P36037 715 aa6.43□□□□□ -1.38
TDP1YBR223C MCM7P38132 845 aa6.43□□□□□ -1.38
TDP1YBR223C YBR242WP38331 238 aa6.43□□□□□ -1.38
TDP1YBR223C PLB1P39105 664 aa6.43□□□□□ -1.38
TDP1YBR223C VRG4P40107 337 aa6.43□□□□□ -1.38
TDP1YBR223C COS10P52924 374 aa6.43□□□□□ -1.38
TDP1YBR223C HOS2P53096 452 aaPredicted RBP6.43□□□□□ -1.38
TDP1YBR223C BUD9P53226 547 aa6.43□□□□□ -1.38
TDP1YBR223C LSM7P53905 115 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C YPL068CQ02749 293 aa6.43□□□□□ -1.38
TDP1YBR223C NGL2Q03264 515 aaKnown RBP6.43□□□□□ -1.38
TDP1YBR223C BUR2Q05949 395 aa6.43□□□□□ -1.38
TDP1YBR223C IPK1Q06667 281 aa6.43□□□□□ -1.38
TDP1YBR223C XYL2Q07993 356 aa6.43□□□□□ -1.38
TDP1YBR223C NBA1Q08229 501 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms