RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 ATG31Q12421 196 aa8.16□□□□□ -1.1
LSR1LSR1 SFG1Q12507 346 aa8.16□□□□□ -1.1
LSR1LSR1 SUS1Q6WNK7 96 aa8.16□□□□□ -1.1
LSR1LSR1 HRP1Q99383 534 aaKnown RBP8.16□□□□□ -1.1
LSR1LSR1 ZWF1P11412 505 aaKnown RBP8.15□□□□□ -1.1
LSR1LSR1 NCP1P16603 691 aaKnown RBP8.15□□□□□ -1.1
LSR1LSR1 THI4P32318 326 aa8.15□□□□□ -1.1
LSR1LSR1 VMA8P32610 256 aaKnown RBP8.15□□□□□ -1.1
LSR1LSR1 RSM22P36056 628 aa8.15□□□□□ -1.1
LSR1LSR1 SRO77P38163 1010 aa8.15□□□□□ -1.1
LSR1LSR1 RRN10P38204 145 aa8.15□□□□□ -1.1
LSR1LSR1 YJL049WP47048 450 aa8.15□□□□□ -1.1
LSR1LSR1 RAD17P48581 401 aa8.15□□□□□ -1.1
LSR1LSR1 SDT1P53078 280 aa8.15□□□□□ -1.1
LSR1LSR1 YGR266WP53326 701 aa8.15□□□□□ -1.1
LSR1LSR1 MEP3P53390 489 aa8.15□□□□□ -1.1
LSR1LSR1 BUD17P53727 317 aa8.15□□□□□ -1.1
LSR1LSR1 YMR310CQ04867 317 aaPredicted RBP8.15□□□□□ -1.1
LSR1LSR1 RQC1Q05468 723 aaKnown RBP8.15□□□□□ -1.1
LSR1LSR1 PDR8Q06149 701 aa8.15□□□□□ -1.1
LSR1LSR1 YLR173WQ06247 608 aa8.15□□□□□ -1.1
LSR1LSR1 VPS36Q06696 566 aa8.15□□□□□ -1.1
LSR1LSR1 ASR1Q06834 288 aa8.15□□□□□ -1.1
LSR1LSR1 REX4Q08237 289 aa8.15□□□□□ -1.1
LSR1LSR1 YNG1Q08465 219 aa8.15□□□□□ -1.1
LSR1LSR1 VPS68Q12016 184 aa8.15□□□□□ -1.1
LSR1LSR1 ATP16Q12165 160 aa8.15□□□□□ -1.1
LSR1LSR1 YEL009C-AA0A023PZF2 135 aa8.14□□□□□ -1.11
LSR1LSR1 COX3P00420 269 aa8.14□□□□□ -1.11
LSR1LSR1 HIS7P33734 552 aaKnown RBP8.14□□□□□ -1.11
LSR1LSR1 YBR063CP38083 404 aa8.14□□□□□ -1.11
LSR1LSR1 TAE1P38340 232 aa8.14□□□□□ -1.11
LSR1LSR1 YHR035WP38769 630 aa8.14□□□□□ -1.11
LSR1LSR1 MET30P39014 640 aa8.14□□□□□ -1.11
LSR1LSR1 PTC2P39966 464 aaKnown RBP8.14□□□□□ -1.11
LSR1LSR1 APS3P47064 194 aa8.14□□□□□ -1.11
LSR1LSR1 ROG1P53118 685 aa8.14□□□□□ -1.11
LSR1LSR1 IMO32P53219 342 aa8.14□□□□□ -1.11
LSR1LSR1 YNR021WP53723 404 aaKnown RBP8.14□□□□□ -1.11
LSR1LSR1 CWC25P53854 179 aaKnown RBP8.14□□□□□ -1.11
LSR1LSR1 MTQ1P53944 314 aa8.14□□□□□ -1.11
LSR1LSR1 TDA1Q03533 586 aa8.14□□□□□ -1.11
LSR1LSR1 VID22Q05934 901 aa8.14□□□□□ -1.11
LSR1LSR1 RRP9Q06506 573 aaKnown RBP8.14□□□□□ -1.11
LSR1LSR1 YPR064WQ12492 139 aa8.14□□□□□ -1.11
LSR1LSR1 LSO1Q3E827 93 aa8.14□□□□□ -1.11
LSR1LSR1 YKR104WP0CE69 306 aa8.13□□□□□ -1.11
LSR1LSR1 FPR1P20081 114 aaKnown RBP8.13□□□□□ -1.11
LSR1LSR1 SUR1P33300 382 aa8.13□□□□□ -1.11
LSR1LSR1 BNA4P38169 460 aa8.13□□□□□ -1.11
LSR1LSR1 YJL068CP40363 299 aa8.13□□□□□ -1.11
LSR1LSR1 HXT9P40885 567 aa8.13□□□□□ -1.11
LSR1LSR1 MAD2P40958 196 aa8.13□□□□□ -1.11
LSR1LSR1 UBC9P50623 157 aaPredicted RBP8.13□□□□□ -1.11
LSR1LSR1 DBP6P53734 629 aaKnown RBP8.13□□□□□ -1.11
LSR1LSR1 RHO4Q00246 291 aa8.13□□□□□ -1.11
LSR1LSR1 MRPS16Q02608 121 aa8.13□□□□□ -1.11
LSR1LSR1 MRPL35Q06678 367 aa8.13□□□□□ -1.11
LSR1LSR1 CDA2Q06703 312 aa8.13□□□□□ -1.11
LSR1LSR1 YDL129WQ07555 291 aa8.13□□□□□ -1.11
LSR1LSR1 YLR040CQ07988 224 aa8.13□□□□□ -1.11
LSR1LSR1 RRP40Q08285 240 aaKnown RBP8.13□□□□□ -1.11
LSR1LSR1 PDH1Q12428 516 aaKnown RBP8.13□□□□□ -1.11
LSR1LSR1 YPR015CQ12531 247 aa8.13□□□□□ -1.11
LSR1LSR1 CYC1P00044 109 aaPredicted RBP8.12□□□□□ -1.11
LSR1LSR1 INH1P01097 85 aa8.12□□□□□ -1.11
LSR1LSR1 SIR2P06700 562 aa8.12□□□□□ -1.11
LSR1LSR1 STE7P06784 515 aa8.12□□□□□ -1.11
LSR1LSR1 RAM1P22007 431 aa8.12□□□□□ -1.11
LSR1LSR1 NAR1P23503 491 aaKnown RBP8.12□□□□□ -1.11
LSR1LSR1 TOD6P34219 525 aa8.12□□□□□ -1.11
LSR1LSR1 ALP1P38971 573 aa8.12□□□□□ -1.11
LSR1LSR1 RGA1P39083 1007 aa8.12□□□□□ -1.11
LSR1LSR1 PHM8P40025 321 aa8.12□□□□□ -1.11
LSR1LSR1 MNT3P40549 630 aa8.12□□□□□ -1.11
LSR1LSR1 MET28P40573 187 aa8.12□□□□□ -1.11
LSR1LSR1 PFS2P42841 465 aaKnown RBP8.12□□□□□ -1.11
LSR1LSR1 AAD14P42884 376 aa8.12□□□□□ -1.11
LSR1LSR1 YGR210CP42942 411 aa8.12□□□□□ -1.11
LSR1LSR1 ERG26P53199 349 aaKnown RBP8.12□□□□□ -1.11
LSR1LSR1 BUD9P53226 547 aa8.12□□□□□ -1.11
LSR1LSR1 YGR067CP53243 804 aa8.12□□□□□ -1.11
LSR1LSR1 ART5P53244 586 aaKnown RBP8.12□□□□□ -1.11
LSR1LSR1 DID2P69771 204 aa8.12□□□□□ -1.11
LSR1LSR1 EAR1Q03212 550 aa8.12□□□□□ -1.11
LSR1LSR1 OST6Q03723 332 aa8.12□□□□□ -1.11
LSR1LSR1 MSS11Q03825 758 aa8.12□□□□□ -1.11
LSR1LSR1 ROY1Q04847 553 aa8.12□□□□□ -1.11
LSR1LSR1 BOP2Q06150 570 aa8.12□□□□□ -1.11
LSR1LSR1 YOL163WP0CF20 169 aa8.11□□□□□ -1.11
LSR1LSR1 SNF6P18888 332 aa8.11□□□□□ -1.11
LSR1LSR1 NTH1P32356 751 aa8.11□□□□□ -1.11
LSR1LSR1 HYM1P32464 399 aa8.11□□□□□ -1.11
LSR1LSR1 SNU114P36048 1008 aaKnown RBP8.11□□□□□ -1.11
LSR1LSR1 GLY1P37303 387 aaKnown RBP8.11□□□□□ -1.11
LSR1LSR1 ASC1P38011 319 aaKnown RBP8.11□□□□□ -1.11
LSR1LSR1 SHE1P38200 338 aa8.11□□□□□ -1.11
LSR1LSR1 SAP30P38429 201 aa8.11□□□□□ -1.11
LSR1LSR1 YEL068CP39977 110 aa8.11□□□□□ -1.11
LSR1LSR1 MOB1P40484 314 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms