RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 RAB30Q15771 203 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 GRIK4Q16099 956 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 TMEM240Q5SV17 173 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 RASIP1Q5U651 963 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 CNKSR3Q6P9H4 555 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 B3GNT9Q6UX72 402 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 MIER3Q7Z3K6 550 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 ETNPPLQ8TBG4 499 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 SEPT8Q92599 483 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 TNFRSF25Q93038 417 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 PGBD1Q96JS3 809 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 SLC9A7Q96T83 725 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 SLC4A5Q9BY07 1137 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 NIFKQ9BYG3 293 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 INO80BQ9C086 356 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.86
PPP4R1-210ENST00000578557 KDM3AQ9Y4C1 1321 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 TK2O00142 265 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 ASAP2O43150 1006 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 NEMFO60524 1076 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 LYPLA2O95372 231 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 CYP2C9P11712 490 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 INSRRP14616 1297 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 COL9A1P20849 921 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 CYP2C18P33260 490 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 THPOP40225 353 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 PRPHP41219 470 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 QARSP47897 775 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 PLCB4Q15147 1175 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 CALCRLQ16602 461 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 TMEM266Q2M3C6 531 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 ZNF365Q70YC5 407 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 BRAPQ7Z569 592 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 C4orf19Q8IY42 314 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 RASGRP4Q8TDF6 673 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 AIFM3Q96NN9 605 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 FTOQ9C0B1 505 aaKnown RBP eCLIP9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 SETD4Q9NVD3 440 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 MSRAQ9UJ68 235 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 SLC4A7Q9Y6M7 1214 aa9.64□□□□□ -0.87
PPP4R1-210ENST00000578557 GPR182O15218 404 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 TREHO43280 583 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 JAK2O60674 1132 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 LARGE1O95461 756 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 CCNE2O96020 404 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 ITGB8P26012 769 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 KLRC1P26715 233 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 KCNJ6P48051 423 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 CCL23P55773 120 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 SP4Q02446 784 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 POU5F1BQ06416 359 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 SHHQ15465 462 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 TRIM71Q2Q1W2 868 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 ARL6IP4Q66PJ3 421 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 HAUS3Q68CZ6 603 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 MTHFD1LQ6UB35 978 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 MTMR9Q96QG7 549 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 MAP7D2Q96T17 732 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 PCYT2Q99447 389 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 GABBR1Q9UBS5 961 aa9.63□□□□□ -0.87
PPP4R1-210ENST00000578557 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 TDP2O95551 362 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 OATP04181 439 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 GJB2P29033 226 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 RFC5P40937 340 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 FXR1P51114 621 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 TBC1D8BQ0IIM8 1120 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 NR5A1Q13285 461 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 ZNF618Q5T7W0 954 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 ADGRD1Q6QNK2 874 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 CCDC60Q8IWA6 550 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 TCP11Q8WWU5 503 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 CTAGE1Q96RT6 745 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 BCAS3Q9H6U6 928 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 TUFT1Q9NNX1 390 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 ANKEF1Q9NU02 776 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 PKD2L1Q9P0L9 805 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 PCDHA11Q9Y5I1 949 aa9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 ZNFX1Q9P2E3 1918 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-210ENST00000578557 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
PPP4R1-210ENST00000578557 EDIL3O43854 480 aa9.61□□□□□ -0.87
PPP4R1-210ENST00000578557 AMHP03971 560 aa9.61□□□□□ -0.87
PPP4R1-210ENST00000578557 SCP2P22307 547 aa9.61□□□□□ -0.87
PPP4R1-210ENST00000578557 CRYBB1P53674 252 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-210ENST00000578557 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms