RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 DCTN3O75935 186 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SEC31AO94979 1220 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 FAM200BP0CF97 657 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 KRT13P13646 458 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 HMGCS2P54868 508 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ROR2Q01974 943 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 STAG2Q8N3U4 1231 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 MMP19Q99542 508 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 GJB4Q9NTQ9 266 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PLEKHG2Q9H7P9 1386 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 RIC1Q4ADV7 1423 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 NUP98P52948 1817 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 TLDC2A0PJX2 215 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 HTRA3P83110 453 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 NNTQ13423 1086 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 FAM133BQ5BKY9 247 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 MFSD4BQ5TF39 518 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PDXDC1Q6P996 788 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 RSPH3Q86UC2 560 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ANKRD35Q8N283 1001 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 METTL13Q8N6R0 699 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CFAP61Q8NHU2 1237 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CLMNQ96JQ2 1002 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 AIFM3Q96NN9 605 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 TRAPPC9Q96Q05 1148 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SPZ1Q9BXG8 430 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 BLZF1Q9H2G9 400 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 IVNS1ABPQ9Y6Y0 642 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 KRT8P05787 483 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 IL9RQ01113 521 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PDE4DQ08499 809 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 KRR1Q13601 381 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 LONRF3Q496Y0 759 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 GJC2Q5T442 439 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SYCP2LQ5T4T6 812 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 LGSNQ5TDP6 509 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 IGSF22Q8N9C0 903 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 LRRC8CQ8TDW0 803 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PI4KBQ9UBF8 816 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CCDC159P0C7I6 412 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 STX17P56962 302 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SPATA1Q5VX52 437 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 AFAP1L2Q8N4X5 818 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SLC17A8Q8NDX2 589 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CEP95Q96GE4 821 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 HINFPQ9BQA5 517 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 TMEM60Q9H2L4 133 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ITM2BQ9Y287 266 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 WDR37Q9Y2I8 494 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ZMYM6O95789 1325 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 YDJCA8MPS7 323 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 BACH1O14867 736 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PDE5AO76074 875 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 TECP42680 631 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 STAT2P52630 851 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CASP7P55210 303 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 HDAC4P56524 1084 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ARID5AQ03989 594 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ITIH3Q06033 890 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 SEL1L2Q5TEA6 688 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 DENND2CQ68D51 928 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 GALNT17Q6IS24 598 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 PNMA1Q8ND90 353 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ENOX1Q8TC92 643 aaKnown RBP6.45□□□□□ -1.38
CNOT1-211ENST00000567188 ANKRD36CQ5JPF3 1778 aa6.45□□□□□ -1.38
CNOT1-211ENST00000567188 CTNNA2P26232 953 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 SNX1Q13596 522 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 STRIP1Q5VSL9 837 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 EXOC8Q8IYI6 725 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 CCDC28BQ9BUN5 200 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 CARD8Q9Y2G2 431 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 A0A087WWV3 80 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TRIM66O15016 1216 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TSPY1Q01534 308 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 RIPPLY1Q0D2K3 151 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 KPNB1Q14974 876 aaKnown RBP6.44□□□□□ -1.38
CNOT1-211ENST00000567188 ARHGEF18Q6ZSZ5 1173 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TMCO5AQ8N6Q1 288 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TRIML2Q8N7C3 387 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-211ENST00000567188 PFDN4Q9NQP4 134 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TAF6LQ9Y6J9 622 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 KLHL33A6NCF5 533 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 IKBKBO14920 756 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 AREL1O15033 823 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 SEMA3EO15041 775 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 TEDDM1Q5T9Z0 273 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 NLRP14Q86W24 1093 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 SYCP3Q8IZU3 236 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 GRAMD1AQ96CP6 724 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 ZBTB10Q96DT7 871 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 OSBPL3Q9H4L5 887 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 FAM96AQ9H5X1 160 aa6.44□□□□□ -1.38
CNOT1-211ENST00000567188 SUCLA2Q9P2R7 463 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-211ENST00000567188 UTYO14607 1347 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms