RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 EPXP11678 715 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 CKBP12277 381 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 SELPP16109 830 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 HOXC8P31273 242 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 NT5C2P49902 561 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 CHMP4BP1P59074 171 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 GRB10Q13322 594 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 BFSP2Q13515 415 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 STXBP2Q15833 593 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 HSDL1Q3SXM5 330 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 ZNF618Q5T7W0 954 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 MYSM1Q5VVJ2 828 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 STOX1Q6ZVD7 989 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 LRRC8DQ7L1W4 858 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 CHST3Q7LGC8 479 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 IQCA1Q86XH1 822 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 RETREG2Q8NC44 543 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 PPTC7Q8NI37 304 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 CAGE1Q8TC20 777 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 AFAP1L1Q8TED9 768 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 ARNTL2Q8WYA1 636 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 UHRF1Q96T88 793 aaPredicted RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 PDCD2LQ9BRP1 358 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 C16orf70Q9BSU1 422 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 NUCKS1Q9H1E3 243 aaKnown RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 MRPL11Q9Y3B7 192 aaKnown RBP6.75□□□□□ -1.33
USP3-215ENST00000559771 TELO2Q9Y4R8 837 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 ATG2AQ2TAZ0 1938 aa6.75□□□□□ -1.33
USP3-215ENST00000559771 MICAL3Q7RTP6 2002 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 B4DLN1 442 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 KLRF2D3W0D1 207 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 ZBTB5O15062 677 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CFBP00751 764 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CYP21A2P08686 494 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 ACTN1P12814 892 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CASTP20810 708 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 HOXA13P31271 388 aaPredicted RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 MRPL12P52815 198 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 MFAP1P55081 439 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 PTH1RQ03431 593 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 TROAPQ12815 778 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 SEMA3FQ13275 785 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 PTK7Q13308 1070 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 AAMPQ13685 434 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 PGM5Q15124 567 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 DGKDQ16760 1214 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 IMMTQ16891 758 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 KIAA0753Q2KHM9 967 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CCDC178Q5BJE1 867 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CELF3Q5SZQ8 465 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 ARHGEF16Q5VV41 709 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 SMYD5Q6GMV2 418 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CNKSR3Q6P9H4 555 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP3-215ENST00000559771 VSIG10LQ86VR7 867 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 MCF2L2Q86YR7 1114 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 MPHOSPH6Q99547 160 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 ALG1Q9BT22 464 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 AMNQ9BXJ7 453 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 FTOQ9C0B1 505 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP3-215ENST00000559771 RIOX1Q9H6W3 641 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 CD320Q9NPF0 282 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 DIAPH3Q9NSV4 1193 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
USP3-215ENST00000559771 BAZ2BQ9UIF8 2168 aaKnown RBP6.74□□□□□ -1.33
USP3-215ENST00000559771 LINC01553A4QN01 128 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 SORBS3O60504 671 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 PPFIA4O75335 1185 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 GJB5O95377 273 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 UBA1P22314 1058 aaKnown RBP6.73□□□□□ -1.33
USP3-215ENST00000559771 ANTXR2P58335 489 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 ERVK-21P61565 698 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
USP3-215ENST00000559771 POU4F2Q12837 409 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 GRM4Q14833 912 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
USP3-215ENST00000559771 SERINC5Q86VE9 423 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
USP3-215ENST00000559771 C7orf31Q8N865 590 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 ARMC2Q8NEN0 867 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 GDPD5Q8WTR4 605 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 PIGSQ96S52 555 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 KRT23Q9C075 422 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 EPHX3Q9H6B9 360 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 CTNNA3Q9UI47 895 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 PCDHA1Q9Y5I3 950 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 COL4A6Q14031 1691 aa6.73□□□□□ -1.33
USP3-215ENST00000559771 NLRC5Q86WI3 1866 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms