RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 GNALP38405 381 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CDKN1CP49918 316 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 PPP2R5CQ13362 524 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CBX2Q14781 532 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 SPECC1Q5M775 1068 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CEP85LQ5SZL2 805 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 IFIT1BQ5T764 474 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 ISM2Q6H9L7 571 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 INTS5Q6P9B9 1019 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 ARHGAP27Q6ZUM4 889 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 C15orf52Q6ZUT6 534 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 RPGRQ92834 1020 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 MAP4K1Q92918 833 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 IFT43Q96FT9 208 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SUCLG2Q96I99 432 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SPATA17Q96L03 361 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 HAUS7Q99871 368 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 AP1M1Q9BXS5 423 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 RSPH9Q9H1X1 276 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZNF69Q9UC07 566 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 FHOD1Q9Y613 1164 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PTCH2Q9Y6C5 1203 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SNED1Q8TER0 1413 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 TNFRSF10BO14763 440 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 TBX3O15119 743 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ATP8B1O43520 1251 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 DESP17661 470 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 KRT9P35527 623 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 LBRQ14739 615 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 HIF1AQ16665 826 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 GNPTABQ3T906 1256 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 FKBP15Q5T1M5 1219 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CAPRIN2Q6IMN6 1127 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 UBE2Q1Q7Z7E8 422 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CLASRPQ8N2M8 674 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZBTB38Q8NAP3 1195 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 HOOK2Q96ED9 719 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZMAT2Q96NC0 199 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 UIMC1Q96RL1 719 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SLC7A5P2Q9GIP4 190 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZCWPW1Q9H0M4 648 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 LUC7LQ9NQ29 371 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 EXOC1Q9NV70 894 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 FOXD3Q9UJU5 478 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 PRKAB1Q9Y478 270 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PABPN1LA6NDY0 278 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 TSPAN6O43657 245 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ERLIN1O75477 346 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SEC31AO94979 1220 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 MBD3O95983 291 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 MMEP08473 750 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 IL4RP24394 825 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SMARCA1P28370 1054 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 STIP1P31948 543 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 CHKAP35790 457 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 HSPA2P54652 639 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 SCAND1P57086 179 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 INSM1Q01101 510 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 KCTD2Q14681 263 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 RCN1Q15293 331 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PREPLQ4J6C6 727 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 CCDC121Q6ZUS5 278 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 LIX1LQ8IVB5 337 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 JPH3Q8WXH2 748 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 PIGBQ92521 554 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZNF837Q96EG3 531 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 MPP4Q96JB8 637 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 LRFN1Q9P244 771 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 USP16Q9Y5T5 823 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 KLRG2A4D1S0 409 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 F8VZ95 297 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 M0R2C6 588 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 EBAG9O00559 213 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PQBP1O60828 265 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 DTNBO60941 627 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PTGS1P23219 599 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 GMPRP36959 345 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 MASP1P48740 699 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 FILIP1LQ4L180 1135 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 METTL16Q86W50 562 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 TREML1Q86YW5 311 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PASD1Q8IV76 773 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 IQUBQ8NA54 791 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 PCSK9Q8NBP7 692 aaKnown RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 KAT2BQ92831 832 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CSRNP2Q9H175 543 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 KRT84Q9NSB2 600 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 AATFQ9NY61 560 aaKnown RBP eCLIP4.43□□□□□ -1.7
RDH11-204ENST00000553578 PPP1R9AQ9ULJ8 1098 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.43□□□□□ -1.7
RDH11-204ENST00000553578 BRCA1P38398 1863 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 ZNF804BA4D1E1 1349 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 TPPPO94811 219 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 FGFR1OPO95684 399 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.7
RDH11-204ENST00000553578 TMEM62Q0P6H9 643 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 COL19A1Q14993 1142 aa4.42□□□□□ -1.7
RDH11-204ENST00000553578 MAPRE1Q15691 268 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 TDRD10Q5VZ19 366 aaKnown RBP4.42□□□□□ -1.7
RDH11-204ENST00000553578 OTUD6AQ7L8S5 288 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms