RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 SMIM10L2AP0DMW4 78 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 SMIM10L2BP0DMW5 78 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 HOXC8P31273 242 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 SFNP31947 248 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 RFC2P35250 354 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 JAK3P52333 1124 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 NR5A1Q13285 461 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 PTK7Q13308 1070 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 ORC2Q13416 577 aaPredicted RBP8.74□□□□□ -1.01
FAM49B-227ENST00000523514 PPIGQ13427 754 aaKnown RBP eCLIP8.74□□□□□ -1.01
FAM49B-227ENST00000523514 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 GDF6Q6KF10 455 aaPredicted RBP8.74□□□□□ -1.01
FAM49B-227ENST00000523514 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 ANKK1Q8NFD2 765 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 RDM1Q8NG50 284 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 AFAP1L1Q8TED9 768 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 BADQ92934 168 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 FAM20AQ96MK3 541 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 SMC3Q9UQE7 1217 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 PCDHA10Q9Y5I2 948 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 WDR81Q562E7 1941 aa8.74□□□□□ -1.01
FAM49B-227ENST00000523514 IGKV6D-21A0A0A0MT36 114 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 RRN3P2A6NIE6 340 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 BACH1O14867 736 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 EDIL3O43854 480 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 MARCH6O60337 910 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 DTNBO60941 627 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 CAND2O75155 1236 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 BAG4O95429 457 aaKnown RBP8.73□□□□□ -1.01
FAM49B-227ENST00000523514 CCNE2O96020 404 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 PFKMP08237 780 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 STAT5BP51692 787 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 RBL2Q08999 1139 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 PSRC1Q6PGN9 363 aaPredicted RBP8.73□□□□□ -1.01
FAM49B-227ENST00000523514 ABHD15Q6UXT9 468 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 SERINC5Q86VE9 423 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 NOSTRINQ8IVI9 506 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 SLFN12Q8IYM2 578 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 RPUSD2Q8IZ73 545 aaKnown RBP8.73□□□□□ -1.01
FAM49B-227ENST00000523514 TDHQ8IZJ6 230 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 ATP6V0A1Q93050 837 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 FAM167AQ96KS9 214 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 ZNF302Q9NR11 478 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
FAM49B-227ENST00000523514 SAMM50Q9Y512 469 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 TRIP12Q14669 1992 aaPredicted RBP8.73□□□□□ -1.01
FAM49B-227ENST00000523514 COL1A2P08123 1366 aa8.73□□□□□ -1.01
FAM49B-227ENST00000523514 H3BQV1 296 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 K7ELQ4 463 aaPredicted RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 ACTN4O43707 911 aaKnown RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 SLC37A4O43826 429 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 NEMFO60524 1076 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 DKC1O60832 514 aaKnown RBP eCLIP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 PSMD10O75832 226 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 CYP2C9P11712 490 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 SELPP16109 830 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 PDCP20941 246 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 ITGB8P26012 769 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 GJB2P29033 226 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 CYP2C18P33260 490 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 GUCY1B3Q02153 619 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 CUL4AQ13619 759 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 GRIK4Q16099 956 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 KMT5BQ4FZB7 885 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 EARS2Q5JPH6 523 aaKnown RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 TAF2Q6P1X5 1199 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 CCDC60Q8IWA6 550 aaPredicted RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 ATP8B4Q8TF62 1192 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 LMBR1Q8WVP7 490 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 WNT2BQ93097 391 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 SNX21Q969T3 373 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 PCYT2Q99447 389 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 WNT8AQ9H1J5 351 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 MTIF3Q9H2K0 278 aaKnown RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 RNPEPQ9H4A4 650 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 KCNMB3Q9NPA1 279 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 IL23AQ9NPF7 189 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 DISC1Q9NRI5 854 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 TUBE1Q9UJT0 475 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 CEP131Q9UPN4 1083 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 TELO2Q9Y4R8 837 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
FAM49B-227ENST00000523514 IGSF9BQ9UPX0 1349 aa8.72□□□□□ -1.01
FAM49B-227ENST00000523514 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.02
FAM49B-227ENST00000523514 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 CHMP2AO43633 222 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 HBP1O60381 514 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 U2AF2P26368 475 aaKnown RBP eCLIP8.71□□□□□ -1.02
FAM49B-227ENST00000523514 MARK3P27448 753 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 CCL23P55773 120 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 ADAM17P78536 824 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 PPP2R5CQ13362 524 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms