RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SLC24A5Q71RS6 500 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 TDRD5Q8NAT2 981 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 RMDN1Q96DB5 314 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 PCYT2Q99447 389 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 CELF4Q9BZC1 486 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 SEMA4AQ9H3S1 761 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 ELAC1Q9H777 363 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 ENTPD7Q9NQZ7 604 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 RGS18Q9NS28 235 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 TMEM161AQ9NX61 479 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 RTEL1Q9NZ71 1219 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 CDH22Q9UJ99 828 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 WDR81Q562E7 1941 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 USP24Q9UPU5 2620 aa9.66□□□□□ -0.86
CTNNA1-215ENST00000519309 TBKBP1A7MCY6 615 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 MEIS2O14770 477 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 ATP9AO75110 1047 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 PDE4AP27815 886 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 APOBRQ0VD83 1088 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 ANGPT1Q15389 498 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 IMMTQ16891 758 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 SPOUT1Q5T280 376 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 CES5AQ6NT32 575 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 LLGL2Q6P1M3 1020 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 LRRC43Q8N309 656 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 NME8Q8N427 588 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 GLG1Q92896 1179 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 ZBTB10Q96DT7 871 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 TYW1Q9NV66 732 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 DZANK1Q9NVP4 752 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 PCDHB7Q9Y5E2 793 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
CTNNA1-215ENST00000519309 DOCK8Q8NF50 2099 aa9.65□□□□□ -0.87
CTNNA1-215ENST00000519309 CHD8Q9HCK8 2581 aa9.65□□□□□ -0.87
CTNNA1-215ENST00000519309 MYH9P35579 1960 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 PATJQ8NI35 1801 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 ASGR2P07307 311 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 NPR3P17342 541 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 ITGB5P18084 799 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 IGBP1P78318 339 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 FAM189BP81408 668 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 KRT76Q01546 638 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TMEM62Q0P6H9 643 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TROAPQ12815 778 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TMEM266Q2M3C6 531 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 ODR4Q5SWX8 454 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 FAM102BQ5T8I3 360 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 DGLUCYQ7Z3D6 616 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TMEM40Q8WWA1 233 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TNPO1Q92973 898 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 ADAM2Q99965 735 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 RTP3Q9BQQ7 232 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 APOL5Q9BWW9 433 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 TMEM117Q9H0C3 514 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 PUF60Q9UHX1 559 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 UBIAD1Q9Y5Z9 338 aa9.64□□□□□ -0.87
CTNNA1-215ENST00000519309 COL1A2P08123 1366 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 NFASCO94856 1347 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 HOXA2O43364 376 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 RPS6KA5O75582 802 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 EOMESO95936 686 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 LMNAP02545 664 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 FGFR1P11362 822 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 SDSP20132 328 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 SLC26A2P50443 739 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 MTMR1Q13613 665 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 DSC3Q14574 896 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 PUM1Q14671 1186 aaKnown RBP eCLIP9.63□□□□□ -0.879e-7■□□□□ 9.3
CTNNA1-215ENST00000519309 SMC1AQ14683 1233 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 PLCB4Q15147 1175 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 USP17L6PQ6QN14 398 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 MTHFD1LQ6UB35 978 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 KCNT2Q6UVM3 1135 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 CYB5R4Q7L1T6 521 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 PLPPR4Q7Z2D5 763 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 SMARCC2Q8TAQ2 1214 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 TRAPPC12Q8WVT3 735 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 CUL5Q93034 780 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 ZNF558Q96NG5 402 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 SPZ1Q9BXG8 430 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 ATP6V0A4Q9HBG4 840 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 DLL3Q9NYJ7 618 aa9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 NOC2LQ9Y3T9 749 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-215ENST00000519309 MIA3Q5JRA6 1907 aa9.62□□□□□ -0.87
CTNNA1-215ENST00000519309 MAFGO15525 162 aa9.62□□□□□ -0.87
CTNNA1-215ENST00000519309 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-215ENST00000519309 NFX1Q12986 1120 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-215ENST00000519309 LRRC55Q6ZSA7 311 aa9.62□□□□□ -0.87
CTNNA1-215ENST00000519309 FAM228AQ86W67 206 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms