RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 MAMDC4Q6UXC1 1216 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HSCBQ8IWL3 235 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MSL3Q8N5Y2 521 aaKnown RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DNERQ8NFT8 737 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BICD2Q8TD16 824 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 UBXN4Q92575 508 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HPS1Q92902 700 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ARMC5Q96C12 935 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ABHD8Q96I13 439 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNF333Q96JL9 665 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FGD4Q96M96 766 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DEFB118Q96PH6 123 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZMYND12Q9H0C1 365 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ABHD16BQ9H3Z7 469 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NEUROD4Q9HD90 331 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SH3GLB2Q9NR46 395 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GJB4Q9NTQ9 266 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TMEM260Q9NX78 707 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RTEL1Q9NZ71 1219 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PCDHA6Q9UN73 950 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 KCNJ14Q9UNX9 436 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SMC3Q9UQE7 1217 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FNDC3AQ9Y2H6 1198 aaKnown RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PCDHA8Q9Y5H6 950 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 STK36Q9NRP7 1315 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 K7ELQ4 463 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EIF3JO75822 258 aaKnown RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FOSP01100 380 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TFRCP02786 760 aaKnown RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNF865P0CJ78 1059 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCL5P13501 91 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EIF4BP23588 611 aaKnown RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ARSDP51689 593 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GUCY1B3Q02153 619 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ANO1Q5XXA6 986 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SEPT14Q6ZU15 432 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PRICKLE2Q7Z3G6 844 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FBXO16Q8IX29 292 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BLIDQ8IZY5 108 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TRPV1Q8NER1 839 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RASGRP4Q8TDF6 673 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SNX21Q969T3 373 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 C8orf76Q96K31 380 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 IWS1Q96ST2 819 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PDCD2LQ9BRP1 358 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCSER2Q9H7U1 834 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EHMT1Q9H9B1 1298 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CAPN10Q9HC96 672 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PXMP2Q9NR77 195 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PDGFCQ9NRA1 345 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FOXD3Q9UJU5 478 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FAM184BQ9ULE4 1060 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PCDHA4Q9UN74 947 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GPC6Q9Y625 555 aaPredicted RBP6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZSWIM8A7E2V4 1837 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PARP14Q460N5 1801 aa6.61□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ASTN1O14525 1302 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 A0A0G2JMZ2 1700 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LOC102724159A0A0B4J2E5 919 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ESYT2A0FGR8 921 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ADAMTS3O15072 1205 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 UPP2O95045 317 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SGPL1O95470 568 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HSP90AA1P07900 732 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 AKR1A1P14550 325 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GJB2P29033 226 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCND2P30279 289 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ADCYAP1R1P41586 468 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GHRHRQ02643 423 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PGM5Q15124 567 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PWP2Q15269 919 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC144BQ3MJ40 725 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ARSJQ5FYB0 599 aaPredicted RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MAP3K21Q5TCX8 1036 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 KRT40Q6A162 431 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 IQSEC1Q6DN90 963 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GALNT17Q6IS24 598 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BTLAQ7Z6A9 289 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 REXO1Q8N1G1 1221 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC74AQ96AQ1 378 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ANO3Q9BYT9 981 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 WDR11Q9BZH6 1224 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BRMS1Q9HCU9 246 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms