RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MARK3P27448 753 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 CYP2C18P33260 490 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 JAK3P52333 1124 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 FPGSQ05932 587 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 PTK7Q13308 1070 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 PPIGQ13427 754 aaKnown RBP eCLIP8.19□□□□□ -1.1
GYPB-206ENST00000506516 EARS2Q5JPH6 523 aaKnown RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 LARP1BQ659C4 914 aaKnown RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 MCTP1Q6DN14 999 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 NOSTRINQ8IVI9 506 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 HSCBQ8IWL3 235 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 ETNPPLQ8TBG4 499 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 CAGE1Q8TC20 777 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 AFAP1L1Q8TED9 768 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 SNX21Q969T3 373 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 PPP1R12CQ9BZL4 782 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 DISC1Q9NRI5 854 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 NRBP2Q9NSY0 501 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 CHMP2AO43633 222 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 SLC37A4O43826 429 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 HBP1O60381 514 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 NEMFO60524 1076 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 DKC1O60832 514 aaKnown RBP eCLIP8.18□□□□□ -1.1
GYPB-206ENST00000506516 RPLP2P05387 115 aaKnown RBP8.18□□□□□ -1.1
GYPB-206ENST00000506516 CFHP08603 1231 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 ATP2B1P20020 1258 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 ITGB8P26012 769 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 U2AF2P26368 475 aaKnown RBP eCLIP8.18□□□□□ -1.1
GYPB-206ENST00000506516 RFC2P35250 354 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 TRAPPC10P48553 1259 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 CCL23P55773 120 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 USP46P62068 366 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 PPFIA1Q13136 1202 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 ORC2Q13416 577 aaPredicted RBP8.18□□□□□ -1.1
GYPB-206ENST00000506516 CALCRLQ16602 461 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 MIER3Q7Z3K6 550 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 RSPH3Q86UC2 560 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 PCYT2Q99447 389 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
GYPB-206ENST00000506516 UNC45AQ9H3U1 944 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 KCNMB3Q9NPA1 279 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 SETD4Q9NVD3 440 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 GABBR1Q9UBS5 961 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 PCDHA12Q9UN75 941 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 CEP131Q9UPN4 1083 aa8.18□□□□□ -1.1
GYPB-206ENST00000506516 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
GYPB-206ENST00000506516 SPTLC1O15269 473 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TREHO43280 583 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 CAND2O75155 1236 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 HSP90AA1P07900 732 aaKnown RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 PFKMP08237 780 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 CKBP12277 381 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 PDIA4P13667 645 aaKnown RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 INSRRP14616 1297 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 CSF2RAP15509 400 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 HOXC8P31273 242 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 MCM7P33993 719 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 THPOP40225 353 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TXKP42681 527 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 IGBP1P78318 339 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 ZNF200P98182 395 aaPredicted RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 PPP2R5CQ13362 524 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 PLCB4Q15147 1175 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 ZNF174Q15697 407 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 GRIK4Q16099 956 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 ZNF484Q5JVG2 852 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TTC38Q5R3I4 469 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TAF2Q6P1X5 1199 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 SERINC5Q86VE9 423 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 CCDC60Q8IWA6 550 aaPredicted RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 TDHQ8IZJ6 230 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 ATP8B4Q8TF62 1192 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 LMBR1Q8WVP7 490 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 GJA10Q969M2 543 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 FAM167AQ96KS9 214 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 MTIF3Q9H2K0 278 aaKnown RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 PRO3102Q9H379 93 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
GYPB-206ENST00000506516 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
GYPB-206ENST00000506516 RSPH10B2B2RC85 870 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 HOXA2O43364 376 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 FGBP02675 491 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 P4HBP07237 508 aaKnown RBP8.16□□□□□ -1.1
GYPB-206ENST00000506516 RSPH10BP0C881 870 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 ACTN1P12814 892 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 SELPP16109 830 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 NDUFV2P19404 249 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 ATP4AP20648 1035 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 KLRC1P26715 233 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
GYPB-206ENST00000506516 PSMC5P62195 406 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms