RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PTRH1Q86Y79 214 aaKnown RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 SIAH1Q8IUQ4 282 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CHPFQ8IZ52 775 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 MSL3Q8N5Y2 521 aaKnown RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 CCDC89Q8N998 374 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 SH3RF2Q8TEC5 729 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 SLC39A13Q96H72 371 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 NEUROD6Q96NK8 337 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 SMOC1Q9H4F8 434 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 BCAS3Q9H6U6 928 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 PRKRIP1Q9H875 184 aaPredicted RBP5.71□□□□□ -1.5
RTN4-215ENST00000491592 ZNF69Q9UC07 566 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 MAPRE3Q9UPY8 281 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 CASKIN1Q8WXD9 1431 aa5.71□□□□□ -1.5
RTN4-215ENST00000491592 ABCA5Q8WWZ7 1642 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 KDM5BQ9UGL1 1544 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 MYOCOSA0A1B0GUC4 107 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 TCRBV5S2A0A599 114 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 CBX4O00257 560 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 MAN2B1O00754 1011 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 SEMA7AO75326 666 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 HSPA5P11021 654 aaKnown RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 FBLN1P23142 703 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 CFPP27918 469 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 PMLP29590 882 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 MECP2P51608 486 aaKnown RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 JAM2P57087 298 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 LACTBP83111 547 aaPredicted RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 SEPT7Q16181 437 aaKnown RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 CCDC70Q6NSX1 233 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 HHIPL2Q6UWX4 724 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 KCTD1Q719H9 257 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 HDGFL2Q7Z4V5 671 aaPredicted RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 AMIGO3Q86WK7 504 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 MIB1Q86YT6 1006 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 CILP2Q8IUL8 1156 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 FBXO15Q8NCQ5 510 aaPredicted RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 ARRDC4Q8NCT1 418 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 KCNK12Q9HB15 430 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 CABP5Q9NP86 173 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 MBD1Q9UIS9 605 aaPredicted RBP5.7□□□□□ -1.5
RTN4-215ENST00000491592 NUDCQ9Y266 331 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 NCOA1Q15788 1441 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 FMN1Q68DA7 1419 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 FGD6Q6ZV73 1430 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 PTPN23Q9H3S7 1636 aa5.7□□□□□ -1.5
RTN4-215ENST00000491592 CCDC7Q96M83 1385 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 PRDM2Q13029 1718 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 GOLGA6CA6NDK9 693 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 GOLGA6BA6NDN3 693 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 KCNK3O14649 394 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 LTFP02788 710 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 GOLGA6DP0CG33 693 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 SOX5P35711 763 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 TUSC3Q13454 348 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 PCBP1Q15365 356 aaKnown RBP eCLIP5.69□□□□□ -1.5
RTN4-215ENST00000491592 NFE2Q16621 373 aaPredicted RBP5.69□□□□□ -1.5
RTN4-215ENST00000491592 FSTL4Q6MZW2 842 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 ETV3LQ6ZN32 361 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 SYDE1Q6ZW31 735 aaPredicted RBP5.69□□□□□ -1.5
RTN4-215ENST00000491592 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.69□□□□□ -1.5
RTN4-215ENST00000491592 OSTM1Q86WC4 334 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 NOSTRINQ8IVI9 506 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 FAM126BQ8IXS8 530 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 RBM12BQ8IXT5 1001 aaKnown RBP5.69□□□□□ -1.5
RTN4-215ENST00000491592 LRRC56Q8IYG6 542 aaPredicted RBP5.69□□□□□ -1.5
RTN4-215ENST00000491592 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 C2orf69Q8N8R5 385 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 CHAC2Q8WUX2 184 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 WNK4Q96J92 1243 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 ORAI3Q9BRQ5 295 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 SIRT5Q9NXA8 310 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 GOLGA6AQ9NYA3 693 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 TELO2Q9Y4R8 837 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 FGD5Q6ZNL6 1462 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 HMGXB3Q12766 1538 aa5.69□□□□□ -1.5
RTN4-215ENST00000491592 CARMIL1Q5VZK9 1371 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 AKNAQ7Z591 1439 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 TEX51A0A1B0GUA7 166 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 SLC12A8A0AV02 714 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 ZNF891A8MT65 544 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 ALG1L2C9J202 215 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 ASGR2P07307 311 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 MYL3P08590 195 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 FAM163BP0C2L3 166 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 ATF3P18847 181 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 CDR1P51861 262 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 EPHA5P54756 1037 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 SKOR2Q2VWA4 1001 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 GRAMD1BQ3KR37 738 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 INO80DQ53TQ3 878 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 BRDTQ58F21 947 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
RTN4-215ENST00000491592 OTOP1Q7RTM1 612 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
RTN4-215ENST00000491592 NLGN4XQ8N0W4 816 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms