RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 NEDD9Q14511 834 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 PTPN14Q15678 1187 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-233ENST00000489352 KCNT2Q6UVM3 1135 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 SLC44A3Q8N4M1 653 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 FAM49AQ9H0Q0 323 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-233ENST00000489352 TOMM22Q9NS69 142 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 SPG21Q9NZD8 308 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 HCSTQ9UBK5 93 aa13.41□□□□□ -0.26
HDAC6-233ENST00000489352 MAST4O15021 2626 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 PDHBP11177 359 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 PDE4AP27815 886 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 CCND2P30279 289 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 LETM2Q2VYF4 491 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 UNQ6494/PRO21346Q6UXR6 183 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 GPR149Q86SP6 731 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 NXPE3Q969Y0 559 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 TMEM47Q9BQJ4 181 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 PDCD2LQ9BRP1 358 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 CWH43Q9H720 699 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 ATP6V0A4Q9HBG4 840 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 LHX6Q9UPM6 363 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
HDAC6-233ENST00000489352 ASH1LQ9NR48 2969 aaKnown RBP13.4□□□□□ -0.26
HDAC6-233ENST00000489352 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 EPCAMP16422 314 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 SP4Q02446 784 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 GRIK4Q16099 956 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 CDC37Q16543 378 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 CEP85Q6P2H3 762 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 METTL7BQ6UX53 244 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
HDAC6-233ENST00000489352 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 STAMQ92783 540 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
HDAC6-233ENST00000489352 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 RNF113AO15541 343 aaKnown RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 FOXD2O60548 495 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 LRP3O75074 770 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 GLULP15104 373 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 IGBP1P78318 339 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 GIT2Q14161 759 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 PGM5Q15124 567 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 ODR4Q5SWX8 454 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 FAM43BQ6ZT52 329 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 SLC24A5Q71RS6 500 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 TRMT2AQ8IZ69 625 aaKnown RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-233ENST00000489352 ADAM2Q99965 735 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 IGSF9BQ9UPX0 1349 aa13.38□□□□□ -0.27
HDAC6-233ENST00000489352 LRRN2O75325 713 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 GOLGA8HP0CJ92 632 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 FGFR1P11362 822 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 PBX3P40426 434 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 LPAL2Q16609 132 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
HDAC6-233ENST00000489352 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 GPKOWQ92917 476 aaPredicted RBP eCLIP13.37□□□□□ -0.272e-6■■□□□ 12.7
HDAC6-233ENST00000489352 CELF4Q9BZC1 486 aaKnown RBP13.37□□□□□ -0.27
HDAC6-233ENST00000489352 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 IGF2RP11717 2491 aa13.37□□□□□ -0.27
HDAC6-233ENST00000489352 KANSL1LA0AUZ9 987 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 M0R2C6 588 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 HOXA2O43364 376 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 LILRB5O75023 590 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 RETP07949 1114 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 MARK3P27448 753 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 MAGEA9P43362 315 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 NOVP48745 357 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
HDAC6-233ENST00000489352 STARD6P59095 220 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 RING1Q06587 406 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
HDAC6-233ENST00000489352 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms