RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LRRC15Q8TF66 581 aa23■■□□□ 1.27
SDF4-206ENST00000478938 HAO1Q9UJM8 370 aa23■■□□□ 1.27
SDF4-206ENST00000478938 TMCO1Q9UM00 188 aa23■■□□□ 1.27
SDF4-206ENST00000478938 ADAMTS3O15072 1205 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 GNA14O95837 355 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 ETS2P15036 469 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 PDE4DQ08499 809 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 SESTD1Q86VW0 696 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 SLX1AQ9BQ83 275 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 SLITRK6Q9H5Y7 841 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 TXLNGQ9NUQ3 528 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 V9GY48 417 aaPredicted RBP22.99■■□□□ 1.27
SDF4-206ENST00000478938 LRP6O75581 1613 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 TJP3O95049 919 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 CREB1P16220 341 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 DESP17661 470 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 EPHB2P29323 1055 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 DDX50Q9BQ39 737 aaKnown RBP22.99■■□□□ 1.27
SDF4-206ENST00000478938 RNF26Q9BY78 433 aaPredicted RBP22.99■■□□□ 1.27
SDF4-206ENST00000478938 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.99■■□□□ 1.27
SDF4-206ENST00000478938 MYLK2Q9H1R3 596 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 VCX3BQ9H321 246 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 EPB41L4AQ9HCS5 686 aaPredicted RBP22.99■■□□□ 1.27
SDF4-206ENST00000478938 VCX3AQ9NNX9 186 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 LUC7LQ9NQ29 371 aaKnown RBP22.99■■□□□ 1.27
SDF4-206ENST00000478938 MYH4Q9Y623 1939 aa22.99■■□□□ 1.27
SDF4-206ENST00000478938 CCDC188H7C350 402 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 IDH1O75874 414 aaKnown RBP22.98■■□□□ 1.27
SDF4-206ENST00000478938 ANKRD42Q8N9B4 389 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 DENND2DQ9H6A0 471 aaPredicted RBP22.98■■□□□ 1.27
SDF4-206ENST00000478938 ZDHHC18Q9NUE0 388 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 ADAMTS1Q9UHI8 967 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 KCNMA1Q12791 1236 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 Q4G0T1 1027 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 DAAM2Q86T65 1068 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 CCDC84Q86UT8 332 aaPredicted RBP22.98■■□□□ 1.27
SDF4-206ENST00000478938 NBPF15Q8N660 670 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 TSPYL2Q9H2G4 693 aaPredicted RBP22.98■■□□□ 1.27
SDF4-206ENST00000478938 SEMA6BQ9H3T3 888 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 KLHL14Q9P2G3 628 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 NR2E1Q9Y466 385 aa22.98■■□□□ 1.27
SDF4-206ENST00000478938 HNRNPRO43390 633 aaKnown RBP22.97■■□□□ 1.27
SDF4-206ENST00000478938 PLTPP55058 493 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 C6orf118Q5T5N4 469 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 SFMBT2Q5VUG0 894 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 FAM192AQ9GZU8 254 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 ZNF532Q9HCE3 1301 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 SERPING1P05155 500 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 UBTFL6P0CB48 400 aaPredicted RBP22.97■■□□□ 1.27
SDF4-206ENST00000478938 ZBTB48P10074 688 aaPredicted RBP22.97■■□□□ 1.27
SDF4-206ENST00000478938 COPB2P35606 906 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 CCNFP41002 786 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 SLC18A3Q16572 532 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 SPDYCQ5MJ68 293 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 AGGF1Q8N302 714 aaeCLIP22.97■■□□□ 1.27
SDF4-206ENST00000478938 LRRC8CQ8TDW0 803 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 MAF1Q9H063 256 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 SEMA4AQ9H3S1 761 aa22.97■■□□□ 1.27
SDF4-206ENST00000478938 BZW2Q9Y6E2 419 aaKnown RBP22.97■■□□□ 1.27
SDF4-206ENST00000478938 PFDN1O60925 122 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 VHLP40337 213 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 DEUP1Q05D60 604 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 EXOC3L1Q86VI1 746 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 VSIG1Q86XK7 387 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 NRG4Q8WWG1 115 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 TBC1D10AQ9BXI6 508 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 TMEM120BA0PK00 339 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 FOXO6A8MYZ6 492 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 PLEKHA8P1O95397 391 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 MCAMP43121 646 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 MPP3Q13368 585 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 AUHQ13825 339 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 MAN2A1Q16706 1144 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 AKNAD1Q5T1N1 836 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 MFSD6Q6ZSS7 791 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 LRP10Q7Z4F1 713 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 SCG3Q8WXD2 468 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 ERP27Q96DN0 273 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 NAPBQ9H115 298 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 METTL5Q9NRN9 209 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 GH1P01241 217 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 SKIP12755 728 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 LONP1P36776 959 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 KLRC3Q07444 240 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 INTS8Q75QN2 995 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 CRAMP1Q96RY5 1269 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 SPATA16Q9BXB7 569 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 PIH1D3Q9NQM4 214 aaKnown RBP22.96■■□□□ 1.27
SDF4-206ENST00000478938 CCDC87Q9NVE4 849 aa22.96■■□□□ 1.27
SDF4-206ENST00000478938 C5P01031 1676 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 RPTORQ8N122 1335 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 FGFR4P22455 802 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 CCDC6Q16204 474 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 SNX30Q5VWJ9 437 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 RNF43Q68DV7 783 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 ADAT2Q7Z6V5 191 aaKnown RBP22.95■■□□□ 1.26
SDF4-206ENST00000478938 TANGO6Q9C0B7 1094 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 KIAA1683Q9H0B3 1180 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 KBTBD4Q9NVX7 518 aa22.95■■□□□ 1.26
SDF4-206ENST00000478938 INTUQ9ULD6 942 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms