RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 INPP4AQ96PE3 977 aaPredicted RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 MTIF3Q9H2K0 278 aaKnown RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 C6orf50Q9HD87 102 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 KCNJ14Q9UNX9 436 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 EYSQ5T1H1 3165 aa10.41□□□□□ -0.74
SMC4-213ENST00000472282 TCF20Q9UGU0 1960 aaKnown RBP10.41□□□□□ -0.74
SMC4-213ENST00000472282 MYH9P35579 1960 aaKnown RBP10.4□□□□□ -0.74
SMC4-213ENST00000472282 SPATA31C2B4DYI2 1134 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
SMC4-213ENST00000472282 RFXAPO00287 272 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 PPFIA4O75335 1185 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 WFS1O76024 890 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 LGALS2P05162 132 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 CKBP12277 381 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 ATP2A2P16615 1042 aaKnown RBP10.4□□□□□ -0.74
SMC4-213ENST00000472282 JUNDP17535 347 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 XBP1P17861 261 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 GNA11P29992 359 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 ICAM3P32942 547 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 RFC2P35250 354 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 CLK2P49760 499 aaKnown RBP10.4□□□□□ -0.74
SMC4-213ENST00000472282 RBL2Q08999 1139 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 MBTPS1Q14703 1052 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 KCNV1Q6PIU1 500 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 REXO1Q8N1G1 1221 aaKnown RBP10.4□□□□□ -0.74
SMC4-213ENST00000472282 C7orf31Q8N865 590 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 AFAP1L1Q8TED9 768 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 PPM1EQ8WY54 764 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 SNX21Q969T3 373 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 OSBPL7Q9BZF2 842 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 FTOQ9C0B1 505 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC4-213ENST00000472282 GLT8D2Q9H1C3 349 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.74
SMC4-213ENST00000472282 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 ATP9AO75110 1047 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 CA3P07451 260 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 TGFB3P10600 412 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 SELPP16109 830 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 DEFB103AP81534 67 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 SP4Q02446 784 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 AP3B2Q13367 1082 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 CUL4AQ13619 759 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 NPY5RQ15761 445 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 ZNF618Q5T7W0 954 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 PCNX4Q63HM2 1172 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 PPP2R2DQ66LE6 453 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 TEX2Q8IWB9 1127 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 FAM177A1Q8N128 213 aaPredicted RBP10.39□□□□□ -0.75
SMC4-213ENST00000472282 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 DAGLBQ8NCG7 672 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 BICD2Q8TD16 824 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 HLA-CQ95604 372 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 GPR20Q99678 358 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 PHF20Q9BVI0 1012 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 EHMT1Q9H9B1 1298 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 CERS4Q9HA82 394 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
SMC4-213ENST00000472282 KIAA1671Q9BY89 1806 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 LCHNA4D1U4 455 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 H3BRB1 525 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 FIBPO43427 364 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 CXCL10P02778 98 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 ACTN1P12814 892 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 ITGB5P18084 799 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 GJB2P29033 226 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 HOXC8P31273 242 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 WDR5P61964 334 aaKnown RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 GUCY1B3Q02153 619 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 PTK7Q13308 1070 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 TRIM29Q14134 588 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 CCDC85BQ15834 202 aaPredicted RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 GNPTABQ3T906 1256 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 KRT40Q6A162 431 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 METTL7BQ6UX53 244 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 RETREG3Q86VR2 466 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 C8orf76Q96K31 380 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 SLC9A7Q96T83 725 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 GAS2L1Q99501 681 aaPredicted RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 RNPEPQ9H4A4 650 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms