RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PDLIM1O00151 329 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 PSMD10O75832 226 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 CCNE2O96020 404 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 IMPDH2P12268 514 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 AKR1A1P14550 325 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 LINC01599Q8WXQ3 324 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 HAS1Q92839 578 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 COA7Q96BR5 231 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 DDX11Q96FC9 970 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 PIGSQ96S52 555 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 HMX1Q9NP08 348 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-204ENST00000369530 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 LIMCH1Q9UPQ0 1083 aa7.65□□□□□ -1.18
CSDE1-204ENST00000369530 TMEM265A0A087WTH1 108 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 KLRF2D3W0D1 207 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 CHUKO15111 745 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 POLR3GO15318 223 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-204ENST00000369530 LPXNO60711 386 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 ATP9AO75110 1047 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 ERLIN2O94905 339 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 MLLT1Q03111 559 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-204ENST00000369530 BAATQ14032 418 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-204ENST00000369530 PLCB4Q15147 1175 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 FOXR1Q6PIV2 292 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 ZSCAN29Q8IWY8 852 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-204ENST00000369530 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 GUCD1Q96NT3 240 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 NEK1Q96PY6 1258 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 JADE2Q9NQC1 790 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 PCDHA6Q9UN73 950 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 PCDHA8Q9Y5H6 950 aa7.65□□□□□ -1.19
CSDE1-204ENST00000369530 DCHS1Q96JQ0 3298 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 MEFVO15553 781 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 B4GALT4O60513 344 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 PAX7P23759 505 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 LMAN1P49257 510 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 AARSP49588 968 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 TUBB4BP68371 445 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 CCNA1P78396 465 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 APOBRQ0VD83 1088 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 IL17AQ16552 155 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 CPLX2Q6PUV4 134 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 GBP6Q6ZN66 633 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 BRAPQ7Z569 592 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 FERMT3Q86UX7 667 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 RNF168Q8IYW5 571 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 LRRN4CLQ8ND94 238 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 NSUN7Q8NE18 718 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 RABGGTAQ92696 567 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 WRAP73Q9P2S5 460 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ANAPC1Q9H1A4 1944 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 PITPNM1O00562 1244 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 UBA1P22314 1058 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 CHST3Q7LGC8 479 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 SERINC5Q86VE9 423 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 PCDHGA4Q9Y5G9 962 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 GOLGA6L4A6NEF3 574 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ARVCFO00192 962 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 FIBPO43427 364 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 SNUPNO95149 360 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 TIMP1P01033 207 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 GOLGA8HP0CJ92 632 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 PECAM1P16284 738 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 GSDMDP57764 484 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ME3Q16798 604 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 HABP4Q5JVS0 413 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ZNF444Q8N0Y2 327 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 TMTC2Q8N394 836 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 ZNF513Q8N8E2 541 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 FAM71BQ8TC56 605 aa7.64□□□□□ -1.19
CSDE1-204ENST00000369530 TTYH1Q9H313 450 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 AGO4Q9HCK5 861 aaKnown RBP7.64□□□□□ -1.19
CSDE1-204ENST00000369530 CAND2O75155 1236 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 ADCYAP1R1P41586 468 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 SLC1A4P43007 532 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 DSC3Q14574 896 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 KCNA10Q16322 511 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 HYIQ5T013 277 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 YTHDF3Q7Z739 585 aaKnown RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 IFNLR1Q8IU57 520 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 GPRASP2Q96D09 838 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 GTF2IRD1Q9UHL9 959 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 COLQQ9Y215 455 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 H3BQV1 296 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 PPP4R3AQ6IN85 833 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 RALYLQ86SE5 291 aaKnown RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 SPC24Q8NBT2 197 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 GIMAP7Q8NHV1 300 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 PAWRQ96IZ0 340 aaKnown RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CABS1Q96KC9 395 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 VIPAS39Q9H9C1 493 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CBX8Q9HC52 389 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 TSPY2A6NKD2 308 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 C5orf67F2Z3F1 127 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CALM1P0DP23 149 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CALM2P0DP24 149 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CALM3P0DP25 149 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms