RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
COL11A2-201ENST00000341947 ATP7BP35670 1465 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 C21orf2O43822 256 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 CRKP46108 304 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 MMP10P09238 476 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 OCRLQ01968 901 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 IFT88Q13099 833 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 IFT43Q96FT9 208 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 TXLNGQ9NUQ3 528 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 G3BP2Q9UN86 482 aaKnown RBP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 HNRNPCL2B2RXH8 293 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 HNRNPCL1O60812 293 aaKnown RBP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 ZMYND10O75800 440 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 DRP2Q13474 957 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 NEK9Q8TD19 979 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 RASGRF2O14827 1237 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 IFNA8P32881 189 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 PRELPP51888 382 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 ESRRGP62508 458 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 KIAA1586Q9HCI6 787 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 TPX2Q9ULW0 747 aaKnown RBP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SOWAHDA6NJG2 315 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 GCKP35557 465 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 NSUN2Q08J23 767 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
COL11A2-201ENST00000341947 HUS1O60921 280 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 ESRRBO95718 433 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 LIFRP42702 1097 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 SAMSN1Q9NSI8 373 aaKnown RBP16.33■□□□□ 0.21
COL11A2-201ENST00000341947 CLASP1Q7Z460 1538 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 ATP6V1E1P36543 226 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.21
COL11A2-201ENST00000341947 SNX19Q92543 992 aa16.33■□□□□ 0.21
COL11A2-201ENST00000341947 CLDN3O15551 220 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 ARHGDIAP52565 204 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 SNX2O60749 519 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 MAPK6Q16659 721 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 PTPN21Q16825 1174 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 KIF19Q2TAC6 998 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 LRRC31Q6UY01 552 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 BEST2Q8NFU1 509 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 PYCARDQ9ULZ3 195 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
COL11A2-201ENST00000341947 TWF2Q6IBS0 349 aaKnown RBP16.33■□□□□ 0.2
COL11A2-201ENST00000341947 SCN4BQ8IWT1 228 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 FSD1LQ9BXM9 530 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 ITM2BQ9Y287 266 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
COL11A2-201ENST00000341947 ARAP3Q8WWN8 1544 aa16.33■□□□□ 0.2
COL11A2-201ENST00000341947 CFLARO15519 480 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ASNSD1Q9NWL6 643 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 KLHL8Q9P2G9 620 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 HSPA4LO95757 839 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 GPC3P51654 580 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ZBTB41Q5SVQ8 909 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 DGKHQ86XP1 1220 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ZC3H15Q8WU90 426 aaKnown RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 PIGBQ92521 554 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 MAML1Q92585 1016 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 SFI1A8K8P3 1242 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 KRT39Q6A163 491 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 BANK1Q8NDB2 785 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 AP1M1Q9BXS5 423 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 SEC31AO94979 1220 aaKnown RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 EIF3BP55884 814 aaKnown RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 MB21D1Q8N884 522 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 N4BP2L2Q92802 583 aaPredicted RBP16.32■□□□□ 0.2
COL11A2-201ENST00000341947 FMO2Q99518 471 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 RCOR1Q9UKL0 485 aa16.32■□□□□ 0.2
COL11A2-201ENST00000341947 ZBTB5O15062 677 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 NDUFA10O95299 355 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 GLE1Q53GS7 698 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 RBM41Q96IZ5 413 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms