RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TXKP42681 527 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 HERC4Q5GLZ8 1057 aaPredicted RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 SPATA21Q7Z572 469 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MFN1Q8IWA4 741 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 BBOF1Q8ND07 529 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 GPKOWQ92917 476 aaPredicted RBP eCLIP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 EEF2KMTQ96G04 330 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC28BQ9BUN5 200 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 DPH5Q9H2P9 285 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 KLRF2D3W0D1 207 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 RPSAP08865 295 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 UCHL3P15374 230 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 RNASE9P60153 205 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 GSTO1P78417 241 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CAV1Q03135 178 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MAPK7Q13164 816 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 GRB10Q13322 594 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 VSIG1Q86XK7 387 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 DDX42Q86XP3 938 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 JAMLQ86YT9 394 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 STAMBPL1Q96FJ0 436 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TRAF3IP3Q9Y228 551 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TTI1O43156 1089 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 CCNT1O60563 726 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MSH2P43246 934 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PTK2Q05397 1052 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 KCNMA1Q12791 1236 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 TAF11Q15544 211 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 PPFIBP2Q8ND30 876 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 ARHGEF2Q92974 986 aaKnown RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 L3MBTL3Q96JM7 780 aaPredicted RBP5.18□□□□□ -1.58
PTPN13-201ENST00000316707 POLD4Q9HCU8 107 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 EMILIN3Q9NT22 766 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 MCM9Q9NXL9 1143 aa5.18□□□□□ -1.58
PTPN13-201ENST00000316707 SNUPNO95149 360 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TECP42680 631 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ADCY7P51828 1080 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 PLTPP55058 493 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CETN1Q12798 172 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 KCNH2Q12809 1159 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 DYNC1I2Q13409 638 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CDCA2Q69YH5 1023 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ARHGAP18Q8N392 663 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 RASGRP4Q8TDF6 673 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 INPP5DQ92835 1189 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SERPINB12Q96P63 405 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 MMTAG2Q9BU76 263 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 PPCSQ9HAB8 311 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ARHGEF3Q9NR81 526 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CALUO43852 315 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CALB2P22676 271 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 PCK1P35558 622 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CHRNDQ07001 517 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 STRN3Q13033 797 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CHRNA2Q15822 529 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD20A2Q5SQ80 823 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD20A1Q5TYW2 823 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD20A3Q5VUR7 823 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 STXBP4Q6ZWJ1 553 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 INTS8Q75QN2 995 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 EGFL6Q8IUX8 553 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD35Q8N283 1001 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 AGAP11Q8TF27 550 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 MTMR9Q96QG7 549 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 RPS6KC1Q96S38 1066 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 MKNK1Q9BUB5 465 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TXLNGYQ9BZA5 131 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD2Q9GZV1 360 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 GANQ9H2C0 597 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 KCNMB3Q9NPA1 279 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 LRP6O75581 1613 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 KIAA0391O15091 583 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 RGL2O15211 777 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ZWINTO95229 277 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NPTXRO95502 500 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 GAS8O95995 478 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TSPY3P0CV98 308 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TSPY8P0CW00 308 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ROR2Q01974 943 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 QPCTQ16769 361 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SEL1L2Q5TEA6 688 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 DYMQ7RTS9 669 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NT5DC3Q86UY8 548 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ZC3H3Q8IXZ2 948 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TBCKQ8TEA7 893 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ZFAND2BQ8WV99 257 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 PNMA5Q96PV4 448 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 AP1M1Q9BXS5 423 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 RXFP1Q9HBX9 757 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 GOPCQ9HD26 462 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD62A6NC57 917 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ANKRD33BA6NCL7 494 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SPDYE3A6NKU9 549 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NOL4O94818 638 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 GJB6O95452 261 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SKIP12755 728 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NR2F2P24468 414 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 STX2P32856 288 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ARID5AQ03989 594 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SGSM1Q2NKQ1 1148 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms