RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 EMBQ6PCB8 327 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 SFR1Q86XK3 245 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
MDH1-201ENST00000233114 ZNF622Q969S3 477 aaKnown RBP eCLIP10.83□□□□□ -0.68
MDH1-201ENST00000233114 CCDC102AQ96A19 550 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 CRACR2AQ9BSW2 395 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 MKNK1Q9BUB5 465 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 NLRC4Q9NPP4 1024 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 KCNQ5Q9NR82 932 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 TBC1D7Q9P0N9 293 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 INTUQ9ULD6 942 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 RABGAP1Q9Y3P9 1069 aa10.83□□□□□ -0.68
MDH1-201ENST00000233114 NPHP3-ACAD11A0A0J9YXS1 232 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 FAM86B1E9PN63 330 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 IVLP07476 585 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 FAM86B2P0C5J1 330 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 XRCC5P13010 732 aaKnown RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 EPHB4P54760 987 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 PPP2R5CQ13362 524 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 RAPGEF1Q13905 1077 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 STXBP4Q6ZWJ1 553 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.82□□□□□ -0.68
MDH1-201ENST00000233114 CAVIN3Q969G5 261 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 GJA10Q969M2 543 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 EIF2AK1Q9BQI3 630 aaKnown RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 SELENOOQ9BVL4 669 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 SUGCTQ9HAC7 445 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 STIM2Q9P246 746 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 FAN1Q9Y2M0 1017 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 MYH10P35580 1976 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 ZC3H4Q9UPT8 1303 aaKnown RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 IGLV3-22A0A075B6J6 115 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 A0A0A6YYK5 440 aaPredicted RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 OPLAHO14841 1288 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 GH2P01242 217 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 NR3C1P04150 777 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 ACTN2P35609 894 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 ZNF76P36508 570 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 LMAN1P49257 510 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 STAT2P52630 851 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 PABPC4Q13310 644 aaKnown RBP eCLIP10.82□□□□□ -0.687e-9■□□□□ 11.3
MDH1-201ENST00000233114 EXOC3L4Q17RC7 722 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 MEI1Q5TIA1 1274 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 DPY19L2P1Q6NXN4 242 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 LEKR1Q6ZMV7 388 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 GBP6Q6ZN66 633 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 VPS36Q86VN1 386 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 NEK9Q8TD19 979 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 CHURC1Q8WUH1 139 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 P2RX7Q99572 595 aaKnown RBP10.82□□□□□ -0.68
MDH1-201ENST00000233114 WDR11Q9BZH6 1224 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 DEFB129Q9H1M3 183 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 ODF2LQ9ULJ1 636 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 TMX2Q9Y320 296 aa10.82□□□□□ -0.68
MDH1-201ENST00000233114 ASTN1O14525 1302 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 PPP1R12BO60237 982 aaPredicted RBP10.81□□□□□ -0.68
MDH1-201ENST00000233114 RNF40O75150 1001 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 PRPF6O94906 941 aaKnown RBP10.81□□□□□ -0.68
MDH1-201ENST00000233114 GDF11O95390 407 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 UCHL3P15374 230 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 HSPA1LP34931 641 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 CACNB3P54284 484 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 APBA1Q02410 837 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 MYBPC2Q14324 1141 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 EPHA7Q15375 998 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 FKBP1CQ5VVH2 108 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 ALS2CLQ60I27 953 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 C7orf43Q8WVR3 580 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 TBC1D5Q92609 795 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 SLC5A5Q92911 643 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 HSD17B14Q9BPX1 270 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 ZHX3Q9H4I2 956 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 SALL4Q9UJQ4 1053 aa10.81□□□□□ -0.68
MDH1-201ENST00000233114 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
MDH1-201ENST00000233114 RBBP6Q7Z6E9 1792 aaKnown RBP10.8□□□□□ -0.68
MDH1-201ENST00000233114 FRMPD4Q14CM0 1322 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 A6NNZ2 444 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 GCOM1H8Y6P7 765 aaPredicted RBP10.8□□□□□ -0.68
MDH1-201ENST00000233114 N4BP1O75113 896 aaKnown RBP10.8□□□□□ -0.68
MDH1-201ENST00000233114 PALMO75781 387 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 PSMD10O75832 226 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 FLOT1O75955 427 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 FAM13AO94988 1023 aa10.8□□□□□ -0.68
MDH1-201ENST00000233114 SYF2O95926 243 aaKnown RBP10.8□□□□□ -0.68
MDH1-201ENST00000233114 POLR2MP0CAP2 368 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms