RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W PRP3Q03338 469 aaPredicted RBP1.48□□□□□ -2.17
YOP1YPR028W CUE5Q08412 411 aaKnown RBP1.48□□□□□ -2.17
YOP1YPR028W YGK3Q12222 375 aaPredicted RBP1.48□□□□□ -2.17
YOP1YPR028W EAF3Q12432 401 aa1.48□□□□□ -2.17
YOP1YPR028W HTZ1Q12692 134 aaKnown RBP1.48□□□□□ -2.17
YOP1YPR028W POM152P39685 1337 aa1.47□□□□□ -2.17
YOP1YPR028W HSP82P02829 709 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W PAB1P04147 577 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17 RIP-Chip
YOP1YPR028W PIS1P06197 220 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W RPL12AP0CX53 165 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W RPL12BP0CX54 165 aa1.47□□□□□ -2.17
YOP1YPR028W ARF1P11076 181 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W MSI1P13712 422 aa1.47□□□□□ -2.17
YOP1YPR028W PRR1P28708 518 aa1.47□□□□□ -2.17
YOP1YPR028W RAD5P32849 1169 aaPredicted RBP1.47□□□□□ -2.17
YOP1YPR028W DOA1P36037 715 aa1.47□□□□□ -2.17
YOP1YPR028W KAP104P38217 918 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W QDR3P38227 689 aa1.47□□□□□ -2.17
YOP1YPR028W MIG3P39943 394 aa1.47□□□□□ -2.17
YOP1YPR028W AIM10P39965 576 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W SEC28P40509 296 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W HAC1P41546 238 aa1.47□□□□□ -2.17
YOP1YPR028W YFR057WP43625 151 aa1.47□□□□□ -2.17
YOP1YPR028W STE24P47154 453 aa1.47□□□□□ -2.17
YOP1YPR028W ASN2P49090 572 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W MST27P53176 234 aa1.47□□□□□ -2.17
YOP1YPR028W CLD1P53264 445 aa1.47□□□□□ -2.17
YOP1YPR028W RTT102P53330 157 aa1.47□□□□□ -2.17
YOP1YPR028W RCF1Q03713 159 aa1.47□□□□□ -2.17
YOP1YPR028W URC2Q04411 772 aa1.47□□□□□ -2.17
YOP1YPR028W RTN1Q04947 295 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W RIF2Q06208 395 aa1.47□□□□□ -2.17
YOP1YPR028W CMS1Q07897 291 aaKnown RBP1.47□□□□□ -2.17
YOP1YPR028W SMC5Q08204 1093 aa1.47□□□□□ -2.17
YOP1YPR028W AAD15Q08361 143 aa1.47□□□□□ -2.17
YOP1YPR028W RNH203Q12338 110 aa1.47□□□□□ -2.17
YOP1YPR028W IZH2Q12442 317 aa1.47□□□□□ -2.17
YOP1YPR028W SRN2Q99176 213 aa1.47□□□□□ -2.17
YOP1YPR028W OPI3P05375 206 aa1.46□□□□□ -2.18
YOP1YPR028W RPL6BP05739 176 aaKnown RBP1.46□□□□□ -2.18
YOP1YPR028W TPK3P05986 398 aa1.46□□□□□ -2.18
YOP1YPR028W SSC1P0CS90 654 aaKnown RBP1.46□□□□□ -2.18
YOP1YPR028W AAT2P23542 418 aaKnown RBP1.46□□□□□ -2.18
YOP1YPR028W PUP2P32379 260 aa1.46□□□□□ -2.18
YOP1YPR028W DPH5P32469 300 aaPredicted RBP1.46□□□□□ -2.18
YOP1YPR028W MCR1P36060 302 aaKnown RBP1.46□□□□□ -2.18
YOP1YPR028W PFF1P38244 976 aa1.46□□□□□ -2.18
YOP1YPR028W RTC2P38279 296 aa1.46□□□□□ -2.18
YOP1YPR028W GDT1P38301 280 aaPredicted RBP1.46□□□□□ -2.18
YOP1YPR028W YHK8P38776 514 aa1.46□□□□□ -2.18
YOP1YPR028W MNL1P38888 796 aa1.46□□□□□ -2.18
YOP1YPR028W MLH1P38920 769 aa1.46□□□□□ -2.18
YOP1YPR028W EPL1P43572 832 aa1.46□□□□□ -2.18
YOP1YPR028W LCB3P47013 409 aa1.46□□□□□ -2.18
YOP1YPR028W MLC1P53141 149 aa1.46□□□□□ -2.18
YOP1YPR028W TRM112P53738 135 aaPredicted RBP1.46□□□□□ -2.18
YOP1YPR028W MEH1Q02205 184 aa1.46□□□□□ -2.18
YOP1YPR028W RPL6AQ02326 176 aaKnown RBP1.46□□□□□ -2.18
YOP1YPR028W ERO1Q03103 563 aa1.46□□□□□ -2.18
YOP1YPR028W ECM7Q06200 448 aa1.46□□□□□ -2.18
YOP1YPR028W IPK1Q06667 281 aa1.46□□□□□ -2.18
YOP1YPR028W SMF3Q12078 473 aaPredicted RBP1.46□□□□□ -2.18
YOP1YPR028W YDR061WQ12298 539 aa1.46□□□□□ -2.18
YOP1YPR028W YOP1Q12402 180 aa1.46□□□□□ -2.18
YOP1YPR028W YCR024C-BQ3E7Z8 88 aa1.46□□□□□ -2.18
YOP1YPR028W BI3Q9ZZW7 517 aa1.46□□□□□ -2.18
YOP1YPR028W RRP7P25368 297 aaPredicted RBP1.45□□□□□ -2.18
YOP1YPR028W SPT10P35208 640 aa1.45□□□□□ -2.18
YOP1YPR028W GPX2P38143 162 aa1.45□□□□□ -2.18
YOP1YPR028W YBL028CP38202 106 aa1.45□□□□□ -2.18
YOP1YPR028W RXT2P38255 430 aa1.45□□□□□ -2.18
YOP1YPR028W WSS1P38838 269 aa1.45□□□□□ -2.18
YOP1YPR028W DFG10P40526 253 aa1.45□□□□□ -2.18
YOP1YPR028W BIR1P47134 954 aa1.45□□□□□ -2.18
YOP1YPR028W BNS1P50084 137 aa1.45□□□□□ -2.18
YOP1YPR028W PMT5P52867 743 aa1.45□□□□□ -2.18
YOP1YPR028W YIP5P53108 310 aa1.45□□□□□ -2.18
YOP1YPR028W CRH1P53301 507 aa1.45□□□□□ -2.18
YOP1YPR028W COS1P53822 381 aa1.45□□□□□ -2.18
YOP1YPR028W EOS1P53938 366 aa1.45□□□□□ -2.18
YOP1YPR028W TDA1Q03533 586 aa1.45□□□□□ -2.18
YOP1YPR028W ASA1Q06822 443 aa1.45□□□□□ -2.18
YOP1YPR028W YDL114WQ07530 308 aa1.45□□□□□ -2.18
YOP1YPR028W YFH1Q07540 174 aa1.45□□□□□ -2.18
YOP1YPR028W LDS2Q08218 356 aa1.45□□□□□ -2.18
YOP1YPR028W YBL111CQ3E7Y5 667 aa1.45□□□□□ -2.18
YOP1YPR028W RNA1P11745 407 aaKnown RBP1.44□□□□□ -2.18
YOP1YPR028W TIR2P33890 251 aa1.44□□□□□ -2.18
YOP1YPR028W GEP4P38812 185 aa1.44□□□□□ -2.18
YOP1YPR028W BAT1P38891 393 aaKnown RBP1.44□□□□□ -2.18
YOP1YPR028W PTI1P39927 425 aaPredicted RBP1.44□□□□□ -2.18
YOP1YPR028W OXA1P39952 402 aa1.44□□□□□ -2.18
YOP1YPR028W YNL208WP40159 199 aaKnown RBP1.44□□□□□ -2.18
YOP1YPR028W AIP1P46680 615 aaKnown RBP1.44□□□□□ -2.18
YOP1YPR028W PGU1P47180 361 aa1.44□□□□□ -2.18
YOP1YPR028W TOS2P50078 622 aa1.44□□□□□ -2.18
YOP1YPR028W RRN9P53437 365 aa1.44□□□□□ -2.18
YOP1YPR028W YPR091CQ06833 770 aa1.44□□□□□ -2.18
YOP1YPR028W NOP6Q07623 225 aaKnown RBP1.44□□□□□ -2.18
YOP1YPR028W FCY22Q12119 530 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms