RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YPL071CQ02864 156 aa5.21□□□□□ -1.58
PDH1YPR002W VHS1Q03785 461 aa5.21□□□□□ -1.58
PDH1YPR002W RRP45Q05636 305 aaKnown RBP5.21□□□□□ -1.58
PDH1YPR002W RGC1Q06108 1083 aaKnown RBP5.21□□□□□ -1.58
PDH1YPR002W ARO10Q06408 635 aa5.21□□□□□ -1.58
PDH1YPR002W RAX1Q08760 435 aa5.21□□□□□ -1.58
PDH1YPR002W YOR387CQ08910 206 aa5.21□□□□□ -1.58
PDH1YPR002W YBR298C-AQ8TGK4 73 aa5.21□□□□□ -1.58
PDH1YPR002W SAR1P20606 190 aaKnown RBP5.2□□□□□ -1.58
PDH1YPR002W SGV1P23293 657 aaKnown RBP5.2□□□□□ -1.58
PDH1YPR002W IDH1P28834 360 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
PDH1YPR002W VPH1P32563 840 aaKnown RBP5.2□□□□□ -1.58
PDH1YPR002W HIS7P33734 552 aaKnown RBP5.2□□□□□ -1.58
PDH1YPR002W YKL063CP35725 167 aa5.2□□□□□ -1.58
PDH1YPR002W DOT6P40059 670 aaKnown RBP5.2□□□□□ -1.58
PDH1YPR002W MNN5P46982 586 aa5.2□□□□□ -1.58
PDH1YPR002W SNX4P47057 423 aa5.2□□□□□ -1.58
PDH1YPR002W HMS2P47175 358 aa5.2□□□□□ -1.58
PDH1YPR002W MUP1P50276 574 aa5.2□□□□□ -1.58
PDH1YPR002W COQ6P53318 479 aa5.2□□□□□ -1.58
PDH1YPR002W MRPS16Q02608 121 aa5.2□□□□□ -1.58
PDH1YPR002W GIP3Q03016 1276 aa5.2□□□□□ -1.58
PDH1YPR002W DLT1Q04216 342 aa5.2□□□□□ -1.58
PDH1YPR002W COS7Q07788 383 aa5.2□□□□□ -1.58
PDH1YPR002W SUT2Q12286 268 aa5.2□□□□□ -1.58
PDH1YPR002W YLR122CQ12312 125 aa5.2□□□□□ -1.58
PDH1YPR002W YOR012WQ12351 137 aa5.2□□□□□ -1.58
PDH1YPR002W RTR2Q12378 196 aa5.2□□□□□ -1.58
PDH1YPR002W ATP4P05626 244 aa5.19□□□□□ -1.58
PDH1YPR002W LEU4P06208 619 aaKnown RBP5.19□□□□□ -1.58
PDH1YPR002W RRP7P25368 297 aaPredicted RBP5.19□□□□□ -1.58
PDH1YPR002W RPC34P32910 317 aa5.19□□□□□ -1.58
PDH1YPR002W NIC96P34077 839 aa5.19□□□□□ -1.58
PDH1YPR002W MAC1P35192 417 aa5.19□□□□□ -1.58
PDH1YPR002W DHR2P36009 735 aaPredicted RBP5.19□□□□□ -1.58
PDH1YPR002W KAE1P36132 386 aa5.19□□□□□ -1.58
PDH1YPR002W MRPL40P36534 297 aa5.19□□□□□ -1.58
PDH1YPR002W YBR242WP38331 238 aa5.19□□□□□ -1.58
PDH1YPR002W MBP1P39678 833 aa5.19□□□□□ -1.58
PDH1YPR002W YFL052WP43551 465 aa5.19□□□□□ -1.58
PDH1YPR002W MDV1P47025 714 aa5.19□□□□□ -1.58
PDH1YPR002W YAE1P47118 141 aaPredicted RBP5.19□□□□□ -1.58
PDH1YPR002W TNA1P53322 534 aa5.19□□□□□ -1.58
PDH1YPR002W YGR266WP53326 701 aa5.19□□□□□ -1.58
PDH1YPR002W YNL034WP53963 612 aa5.19□□□□□ -1.58
PDH1YPR002W NGL2Q03264 515 aaKnown RBP5.19□□□□□ -1.58
PDH1YPR002W YMR034CQ05131 434 aaPredicted RBP5.19□□□□□ -1.58
PDH1YPR002W SPO77Q06134 477 aa5.19□□□□□ -1.58
PDH1YPR002W HAL9Q12180 1030 aa5.19□□□□□ -1.58
PDH1YPR002W RPN5Q12250 445 aaKnown RBP5.19□□□□□ -1.58
PDH1YPR002W YLR046CQ12253 270 aa5.19□□□□□ -1.58
PDH1YPR002W RRP42Q12277 265 aaPredicted RBP5.19□□□□□ -1.58
PDH1YPR002W NDJ1Q12366 352 aa5.19□□□□□ -1.58
PDH1YPR002W CYC1P00044 109 aaPredicted RBP5.18□□□□□ -1.58
PDH1YPR002W URA3P03962 267 aa5.18□□□□□ -1.58
PDH1YPR002W PDE2P06776 526 aa5.18□□□□□ -1.58
PDH1YPR002W RPL11AP0C0W9 174 aaKnown RBP5.18□□□□□ -1.58
PDH1YPR002W SST2P11972 698 aaKnown RBP5.18□□□□□ -1.58
PDH1YPR002W DBP3P20447 523 aaKnown RBP5.18□□□□□ -1.58
PDH1YPR002W GEX1P25596 615 aa5.18□□□□□ -1.58
PDH1YPR002W YIM1P28625 365 aa5.18□□□□□ -1.58
PDH1YPR002W OAC1P32332 324 aa5.18□□□□□ -1.58
PDH1YPR002W NDC1P32500 655 aa5.18□□□□□ -1.58
PDH1YPR002W CAT2P32796 670 aaKnown RBP5.18□□□□□ -1.58
PDH1YPR002W MSN2P33748 704 aa5.18□□□□□ -1.58
PDH1YPR002W SPO23P33757 523 aa5.18□□□□□ -1.58
PDH1YPR002W LOT5P34234 306 aa5.18□□□□□ -1.58
PDH1YPR002W GEX2P36173 615 aa5.18□□□□□ -1.58
PDH1YPR002W STP2P38704 541 aa5.18□□□□□ -1.58
PDH1YPR002W VRG4P40107 337 aa5.18□□□□□ -1.58
PDH1YPR002W YIR016WP40572 265 aa5.18□□□□□ -1.58
PDH1YPR002W UFE1P41834 346 aa5.18□□□□□ -1.58
PDH1YPR002W GDS1P41913 522 aa5.18□□□□□ -1.58
PDH1YPR002W BPL1P48445 690 aaPredicted RBP5.18□□□□□ -1.58
PDH1YPR002W IMP4P53941 290 aaKnown RBP5.18□□□□□ -1.58
PDH1YPR002W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
PDH1YPR002W PIR1Q03178 341 aa5.18□□□□□ -1.58
PDH1YPR002W YDR514CQ04408 483 aa5.18□□□□□ -1.58
PDH1YPR002W CLP1Q08685 445 aaPredicted RBP5.18□□□□□ -1.58
PDH1YPR002W RRG7Q08774 242 aaPredicted RBP5.18□□□□□ -1.58
PDH1YPR002W NDD1Q08887 554 aa5.18□□□□□ -1.58
PDH1YPR002W BSC1Q12140 328 aa5.18□□□□□ -1.58
PDH1YPR002W YDR061WQ12298 539 aa5.18□□□□□ -1.58
PDH1YPR002W RPL11BQ3E757 174 aaPredicted RBP5.18□□□□□ -1.58
PDH1YPR002W SIR1P21691 654 aa5.17□□□□□ -1.58
PDH1YPR002W LHP1P33399 275 aaKnown RBP5.17□□□□□ -1.58
PDH1YPR002W PRP18P33411 251 aaPredicted RBP5.17□□□□□ -1.58
PDH1YPR002W TOD6P34219 525 aa5.17□□□□□ -1.58
PDH1YPR002W CCZ1P38273 704 aa5.17□□□□□ -1.58
PDH1YPR002W RRP4P38792 359 aaKnown RBP5.17□□□□□ -1.58
PDH1YPR002W NVJ1P38881 321 aa5.17□□□□□ -1.58
PDH1YPR002W MLH1P38920 769 aa5.17□□□□□ -1.58
PDH1YPR002W BUR6P40096 142 aa5.17□□□□□ -1.58
PDH1YPR002W ERG10P41338 398 aaKnown RBP5.17□□□□□ -1.58
PDH1YPR002W ECL1P48235 211 aa5.17□□□□□ -1.58
PDH1YPR002W YGR015CP53208 328 aa5.17□□□□□ -1.58
PDH1YPR002W DML1Q03652 475 aa5.17□□□□□ -1.58
PDH1YPR002W TRM82Q03774 444 aa5.17□□□□□ -1.58
PDH1YPR002W YMR087WQ04299 284 aa5.17□□□□□ -1.58
PDH1YPR002W RTN1Q04947 295 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms