RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C OLE1P21147 510 aaKnown RBP4.28□□□□□ -1.72
GDE1YPL110C CCA1P21269 546 aa4.28□□□□□ -1.72
GDE1YPL110C PRP21P32524 280 aaPredicted RBP4.28□□□□□ -1.72
GDE1YPL110C SPO23P33757 523 aa4.28□□□□□ -1.72
GDE1YPL110C IRS4P36115 615 aaKnown RBP4.28□□□□□ -1.72
GDE1YPL110C SRO77P38163 1010 aa4.28□□□□□ -1.72
GDE1YPL110C HSL7P38274 827 aa4.28□□□□□ -1.72
GDE1YPL110C MET28P40573 187 aa4.28□□□□□ -1.72
GDE1YPL110C BUD32P53323 261 aa4.28□□□□□ -1.72
GDE1YPL110C YPL071CQ02864 156 aa4.28□□□□□ -1.72
GDE1YPL110C CAC2Q04199 468 aa4.28□□□□□ -1.72
GDE1YPL110C MRPL1Q04599 285 aa4.28□□□□□ -1.72
GDE1YPL110C MSC3Q05812 728 aa4.28□□□□□ -1.72
GDE1YPL110C FRQ1Q06389 190 aa4.28□□□□□ -1.72
GDE1YPL110C OPT2Q06593 877 aa4.28□□□□□ -1.72
GDE1YPL110C HDA2Q06629 674 aa4.28□□□□□ -1.72
GDE1YPL110C HRD1Q08109 551 aa4.28□□□□□ -1.72
GDE1YPL110C YOL075CQ08234 1294 aa4.28□□□□□ -1.72
GDE1YPL110C GUP2Q08929 609 aa4.28□□□□□ -1.72
GDE1YPL110C YTM1Q12024 460 aaPredicted RBP4.28□□□□□ -1.72
GDE1YPL110C CWC2Q12046 339 aaPredicted RBP4.28□□□□□ -1.72
GDE1YPL110C SVS1Q12254 260 aa4.28□□□□□ -1.72
GDE1YPL110C SPO7P18410 259 aa4.27□□□□□ -1.73
GDE1YPL110C SIS1P25294 352 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C PHO91P27514 894 aa4.27□□□□□ -1.73
GDE1YPL110C SPS19P32573 292 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C RER2P35196 286 aa4.27□□□□□ -1.73
GDE1YPL110C MCH2P36032 473 aa4.27□□□□□ -1.73
GDE1YPL110C YBR056WP38081 501 aa4.27□□□□□ -1.73
GDE1YPL110C YBR013CP38215 129 aa4.27□□□□□ -1.73
GDE1YPL110C FAT1P38225 669 aa4.27□□□□□ -1.73
GDE1YPL110C TCM62P38228 572 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C KSP1P38691 1029 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C YNL320WP42840 284 aa4.27□□□□□ -1.73
GDE1YPL110C GZF3P42944 551 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C RGD2P43556 714 aa4.27□□□□□ -1.73
GDE1YPL110C PUS4P48567 403 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C CTF18P49956 741 aa4.27□□□□□ -1.73
GDE1YPL110C SBH2P52871 88 aa4.27□□□□□ -1.73
GDE1YPL110C VPS9P54787 451 aa4.27□□□□□ -1.73
GDE1YPL110C HLR1Q04429 423 aa4.27□□□□□ -1.73
GDE1YPL110C RTT109Q07794 436 aa4.27□□□□□ -1.73
GDE1YPL110C PML1Q07930 204 aaPredicted RBP4.27□□□□□ -1.73
GDE1YPL110C YDR262WQ12331 272 aa4.27□□□□□ -1.73
GDE1YPL110C FRS1P15624 595 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C LDS1P31379 325 aa4.27□□□□□ -1.73
GDE1YPL110C IXR1P33417 597 aa4.27□□□□□ -1.73
GDE1YPL110C DOA1P36037 715 aa4.27□□□□□ -1.73
GDE1YPL110C SHE3P38272 425 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C CKB2P38930 258 aa4.27□□□□□ -1.73
GDE1YPL110C SAH1P39954 449 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C DSE1P40077 573 aa4.27□□□□□ -1.73
GDE1YPL110C SLZ1P40167 298 aa4.27□□□□□ -1.73
GDE1YPL110C LYS20P48570 428 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C ALT2P52892 507 aa4.27□□□□□ -1.73
GDE1YPL110C YLR283WQ05867 314 aa4.27□□□□□ -1.73
GDE1YPL110C GAS2Q06135 555 aa4.27□□□□□ -1.73
GDE1YPL110C CDC73Q06697 393 aa4.27□□□□□ -1.73
GDE1YPL110C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
GDE1YPL110C DDI2P0CH63 225 aa4.27□□□□□ -1.73
GDE1YPL110C DDI3P0CH64 225 aa4.27□□□□□ -1.73
GDE1YPL110C MAS2P11914 482 aa4.27□□□□□ -1.73
GDE1YPL110C GRX2P17695 143 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C AHC2P25649 128 aa4.27□□□□□ -1.73
GDE1YPL110C SPR1P32603 445 aa4.27□□□□□ -1.73
GDE1YPL110C RGT1P32862 1170 aa4.27□□□□□ -1.73
GDE1YPL110C RRP4P38792 359 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C UTP7P40055 554 aaKnown RBP4.27□□□□□ -1.73
GDE1YPL110C SER2P42941 309 aa4.27□□□□□ -1.73
GDE1YPL110C MNN5P46982 586 aa4.27□□□□□ -1.73
GDE1YPL110C DAN4P47179 1161 aa4.27□□□□□ -1.73
GDE1YPL110C GND2P53319 492 aa4.27□□□□□ -1.73
GDE1YPL110C HCH1P53834 153 aa4.27□□□□□ -1.73
GDE1YPL110C NRK1P53915 240 aa4.27□□□□□ -1.73
GDE1YPL110C ECM9Q02202 377 aa4.27□□□□□ -1.73
GDE1YPL110C POM33Q12164 279 aa4.27□□□□□ -1.73
GDE1YPL110C SFM1Q12314 213 aa4.27□□□□□ -1.73
GDE1YPL110C RPL27AP0C2H6 136 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C RPL27BP0C2H7 136 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C BAR1P12630 587 aa4.26□□□□□ -1.73
GDE1YPL110C CLN3P13365 580 aa4.26□□□□□ -1.73
GDE1YPL110C APE1P14904 514 aa4.26□□□□□ -1.73
GDE1YPL110C SPC34P36131 295 aa4.26□□□□□ -1.73
GDE1YPL110C SHM1P37292 490 aaPredicted RBP4.26□□□□□ -1.73
GDE1YPL110C NCL1P38205 684 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C LCP5P40079 357 aaPredicted RBP4.26□□□□□ -1.73
GDE1YPL110C USE1P53146 245 aa4.26□□□□□ -1.73
GDE1YPL110C YGR035CP53222 116 aa4.26□□□□□ -1.73
GDE1YPL110C AIM36Q03798 255 aa4.26□□□□□ -1.73
GDE1YPL110C ALE1Q08548 619 aa4.26□□□□□ -1.73
GDE1YPL110C YPL199CQ08954 240 aa4.26□□□□□ -1.73
GDE1YPL110C YOR283WQ12040 230 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C YRA1Q12159 226 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C TY1A-BRQ12217 440 aa4.26□□□□□ -1.73
GDE1YPL110C RRD2Q12461 358 aa4.26□□□□□ -1.73
GDE1YPL110C CPR1P14832 162 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C BUD5P25300 642 aaPredicted RBP4.26□□□□□ -1.73
GDE1YPL110C HIS7P33734 552 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C AIM3P38266 947 aaKnown RBP4.26□□□□□ -1.73
GDE1YPL110C YJL206CP39529 758 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms