RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C MDH3P32419 343 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
LDB19YOR322C RIB1P38066 345 aa5.68□□□□□ -1.5
LDB19YOR322C ERG7P38604 731 aa5.68□□□□□ -1.5
LDB19YOR322C SEC24P40482 926 aaKnown RBP5.68□□□□□ -1.5
LDB19YOR322C MIC19P43594 170 aa5.68□□□□□ -1.5
LDB19YOR322C YJR149WP47177 404 aa5.68□□□□□ -1.5
LDB19YOR322C OGG1P53397 376 aaPredicted RBP5.68□□□□□ -1.5
LDB19YOR322C SNU56Q03782 492 aaKnown RBP5.68□□□□□ -1.5
LDB19YOR322C SMA2Q04658 369 aa5.68□□□□□ -1.5
LDB19YOR322C HIM1Q06674 414 aa5.68□□□□□ -1.5
LDB19YOR322C BER1Q06688 274 aaKnown RBP5.68□□□□□ -1.5
LDB19YOR322C TUM1Q08686 304 aaKnown RBP5.68□□□□□ -1.5
LDB19YOR322C FEX1Q08913 375 aa5.68□□□□□ -1.5
LDB19YOR322C YPL257WQ08974 193 aa5.68□□□□□ -1.5
LDB19YOR322C YTM1Q12024 460 aaPredicted RBP5.68□□□□□ -1.5
LDB19YOR322C PSF1Q12488 208 aa5.68□□□□□ -1.5
LDB19YOR322C YPR014CQ6B0W2 109 aa5.68□□□□□ -1.5
LDB19YOR322C QCR7P00128 127 aa5.68□□□□□ -1.5
LDB19YOR322C YUR1P26725 428 aa5.68□□□□□ -1.5
LDB19YOR322C TGL1P34163 548 aa5.68□□□□□ -1.5
LDB19YOR322C VNX1P42839 908 aa5.68□□□□□ -1.5
LDB19YOR322C YJR115WP47152 169 aa5.68□□□□□ -1.5
LDB19YOR322C YGR017WP53210 297 aa5.68□□□□□ -1.5
LDB19YOR322C TEP1P53916 434 aa5.68□□□□□ -1.5
LDB19YOR322C TRM82Q03774 444 aa5.68□□□□□ -1.5
LDB19YOR322C PPN1Q04119 674 aa5.68□□□□□ -1.5
LDB19YOR322C FRQ1Q06389 190 aa5.68□□□□□ -1.5
LDB19YOR322C AAD15Q08361 143 aa5.68□□□□□ -1.5
LDB19YOR322C YPL150WQ12152 901 aa5.68□□□□□ -1.5
LDB19YOR322C RHO1P06780 209 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C MOD5P07884 428 aa5.67□□□□□ -1.5
LDB19YOR322C ZWF1P11412 505 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C MRP13P12686 339 aa5.67□□□□□ -1.5
LDB19YOR322C UBC1P21734 215 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C RPS1BP23248 255 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C DAL2P25335 343 aa5.67□□□□□ -1.5
LDB19YOR322C MCM5P29496 775 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C MVD1P32377 396 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C PIN4P34217 668 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
LDB19YOR322C SKT5P34226 696 aa5.67□□□□□ -1.5
LDB19YOR322C ATG7P38862 630 aa5.67□□□□□ -1.5
LDB19YOR322C SMF1P38925 575 aa5.67□□□□□ -1.5
LDB19YOR322C ERV46P39727 415 aa5.67□□□□□ -1.5
LDB19YOR322C SHO1P40073 367 aa5.67□□□□□ -1.5
LDB19YOR322C BUR6P40096 142 aa5.67□□□□□ -1.5
LDB19YOR322C YGR210CP42942 411 aa5.67□□□□□ -1.5
LDB19YOR322C YGR035CP53222 116 aa5.67□□□□□ -1.5
LDB19YOR322C NRK1P53915 240 aa5.67□□□□□ -1.5
LDB19YOR322C TMN2Q04562 672 aa5.67□□□□□ -1.5
LDB19YOR322C YLR225CQ05948 407 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C WSC3Q12215 556 aa5.67□□□□□ -1.5
LDB19YOR322C RGT2Q12300 763 aa5.67□□□□□ -1.5
LDB19YOR322C HRT3Q12347 344 aa5.67□□□□□ -1.5
LDB19YOR322C TSC13Q99190 310 aa5.67□□□□□ -1.5
LDB19YOR322C DFG16Q99234 619 aa5.67□□□□□ -1.5
LDB19YOR322C BCK1Q01389 1478 aa5.67□□□□□ -1.5
LDB19YOR322C ATP1P07251 545 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C PPR1P07272 904 aaPredicted RBP5.67□□□□□ -1.5
LDB19YOR322C RPL27AP0C2H6 136 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C RPL27BP0C2H7 136 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C AHC2P25649 128 aa5.67□□□□□ -1.5
LDB19YOR322C BEM1P29366 551 aa5.67□□□□□ -1.5
LDB19YOR322C TUL1P36096 758 aa5.67□□□□□ -1.5
LDB19YOR322C MRPL15P36523 253 aa5.67□□□□□ -1.5
LDB19YOR322C ZTA1P38230 334 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C YIR035CP40579 254 aa5.67□□□□□ -1.5
LDB19YOR322C GNA1P43577 159 aaPredicted RBP5.67□□□□□ -1.5
LDB19YOR322C SOL1P50278 321 aa5.67□□□□□ -1.5
LDB19YOR322C ACS2P52910 683 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C AQR1P53943 586 aa5.67□□□□□ -1.5
LDB19YOR322C COG5P53951 403 aa5.67□□□□□ -1.5
LDB19YOR322C ALG11P53954 548 aaKnown RBP5.67□□□□□ -1.5
LDB19YOR322C ARG5,6Q01217 863 aa5.67□□□□□ -1.5
LDB19YOR322C MUS81Q04149 632 aaPredicted RBP5.67□□□□□ -1.5
LDB19YOR322C BUR2Q05949 395 aa5.67□□□□□ -1.5
LDB19YOR322C CDC73Q06697 393 aa5.67□□□□□ -1.5
LDB19YOR322C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
LDB19YOR322C YPL199CQ08954 240 aa5.67□□□□□ -1.5
LDB19YOR322C YOR022CQ12204 715 aa5.67□□□□□ -1.5
LDB19YOR322C YGL194C-AQ2V2P6 80 aa5.67□□□□□ -1.5
LDB19YOR322C SAS5Q99314 248 aa5.67□□□□□ -1.5
LDB19YOR322C CDC28P00546 298 aaKnown RBP5.66□□□□□ -1.5
LDB19YOR322C MTF1P14908 341 aaKnown RBP5.66□□□□□ -1.5
LDB19YOR322C NUP1P20676 1076 aa5.66□□□□□ -1.5
LDB19YOR322C VPS33P20795 691 aa5.66□□□□□ -1.5
LDB19YOR322C MSN1P22148 382 aa5.66□□□□□ -1.5
LDB19YOR322C MGR1P25573 417 aa5.66□□□□□ -1.5
LDB19YOR322C PRX1P34227 261 aaKnown RBP5.66□□□□□ -1.5
LDB19YOR322C AGP2P38090 596 aa5.66□□□□□ -1.5
LDB19YOR322C LDH1P38139 375 aa5.66□□□□□ -1.5
LDB19YOR322C DER1P38307 211 aa5.66□□□□□ -1.5
LDB19YOR322C DIA4P38705 446 aaPredicted RBP5.66□□□□□ -1.5
LDB19YOR322C HRB1P38922 454 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
LDB19YOR322C DHH1P39517 506 aaKnown RBP5.66□□□□□ -1.5
LDB19YOR322C GZF3P42944 551 aaKnown RBP5.66□□□□□ -1.5
LDB19YOR322C MRX5P47007 382 aa5.66□□□□□ -1.5
LDB19YOR322C CTF18P49956 741 aa5.66□□□□□ -1.5
LDB19YOR322C TPN1P53099 579 aa5.66□□□□□ -1.5
LDB19YOR322C SNO4Q04902 237 aa5.66□□□□□ -1.5
LDB19YOR322C HSP33Q08914 237 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms