RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C NDL1Q06568 189 aa3.53□□□□□ -1.84
RPN8YOR261C SPE3Q12074 293 aaKnown RBP3.53□□□□□ -1.84
RPN8YOR261C RPL12AP0CX53 165 aaKnown RBP3.52□□□□□ -1.85
RPN8YOR261C RPL12BP0CX54 165 aa3.52□□□□□ -1.85
RPN8YOR261C NRP1P32770 719 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
RPN8YOR261C RRN9P53437 365 aa3.52□□□□□ -1.85
RPN8YOR261C PRP3Q03338 469 aaPredicted RBP3.52□□□□□ -1.85
RPN8YOR261C YET2Q04210 160 aa3.52□□□□□ -1.85
RPN8YOR261C OPI3P05375 206 aa3.51□□□□□ -1.85
RPN8YOR261C RPL1AP0CX43 217 aaKnown RBP3.51□□□□□ -1.85
RPN8YOR261C RPL1BP0CX44 217 aaKnown RBP3.51□□□□□ -1.85
RPN8YOR261C PHO91P27514 894 aa3.51□□□□□ -1.85
RPN8YOR261C TOA2P32774 122 aa3.51□□□□□ -1.85
RPN8YOR261C SKT5P34226 696 aa3.51□□□□□ -1.85
RPN8YOR261C PMT5P52867 743 aa3.51□□□□□ -1.85
RPN8YOR261C ROG1P53118 685 aa3.51□□□□□ -1.85
RPN8YOR261C CLD1P53264 445 aa3.51□□□□□ -1.85
RPN8YOR261C GYL1Q04322 720 aa3.51□□□□□ -1.85
RPN8YOR261C URC2Q04411 772 aa3.51□□□□□ -1.85
RPN8YOR261C PRM6Q04705 352 aa3.51□□□□□ -1.85
RPN8YOR261C MFG1Q07684 458 aa3.51□□□□□ -1.85
RPN8YOR261C RPN5Q12250 445 aaKnown RBP3.51□□□□□ -1.85
RPN8YOR261C YCR024C-BQ3E7Z8 88 aa3.51□□□□□ -1.85
RPN8YOR261C YSC83P32792 385 aa3.5□□□□□ -1.85
RPN8YOR261C COX13P32799 129 aa3.5□□□□□ -1.85
RPN8YOR261C MCR1P36060 302 aaKnown RBP3.5□□□□□ -1.85
RPN8YOR261C GPX2P38143 162 aa3.5□□□□□ -1.85
RPN8YOR261C OM14P38325 134 aa3.5□□□□□ -1.85
RPN8YOR261C RRP46P53256 223 aaPredicted RBP3.5□□□□□ -1.85
RPN8YOR261C YOP1Q12402 180 aa3.5□□□□□ -1.85
RPN8YOR261C NAG1Q8TGN9 163 aa3.5□□□□□ -1.85
RPN8YOR261C PDE2P06776 526 aa3.49□□□□□ -1.85
RPN8YOR261C PXA2P34230 853 aa3.49□□□□□ -1.85
RPN8YOR261C LRP1P38801 184 aaKnown RBP3.49□□□□□ -1.85
RPN8YOR261C ATM1P40416 690 aa3.49□□□□□ -1.85
RPN8YOR261C VPS9P54787 451 aa3.49□□□□□ -1.85
RPN8YOR261C LIP2Q06005 328 aa3.49□□□□□ -1.85
RPN8YOR261C YPR091CQ06833 770 aa3.49□□□□□ -1.85
RPN8YOR261C ARF1P11076 181 aaKnown RBP3.48□□□□□ -1.85
RPN8YOR261C CDC50P25656 391 aa3.48□□□□□ -1.85
RPN8YOR261C EFM4P40516 257 aa3.48□□□□□ -1.85
RPN8YOR261C PAC11P40960 533 aa3.48□□□□□ -1.85
RPN8YOR261C ALF1P53904 254 aa3.48□□□□□ -1.85
RPN8YOR261C MEH1Q02205 184 aa3.48□□□□□ -1.85
RPN8YOR261C YDL114WQ07530 308 aa3.48□□□□□ -1.85
RPN8YOR261C FCY22Q12119 530 aa3.48□□□□□ -1.85
RPN8YOR261C ERP4Q12450 207 aa3.48□□□□□ -1.85
RPN8YOR261C YDL012CQ12489 107 aa3.48□□□□□ -1.85
RPN8YOR261C SLM5P25345 492 aaKnown RBP3.47□□□□□ -1.85
RPN8YOR261C RAD5P32849 1169 aaPredicted RBP3.47□□□□□ -1.85
RPN8YOR261C TIR2P33890 251 aa3.47□□□□□ -1.85
RPN8YOR261C DOA1P36037 715 aa3.47□□□□□ -1.85
RPN8YOR261C YER186CP40101 306 aa3.47□□□□□ -1.85
RPN8YOR261C YNL208WP40159 199 aaKnown RBP3.47□□□□□ -1.85
RPN8YOR261C ABM1P47146 123 aa3.47□□□□□ -1.85
RPN8YOR261C YDR541CQ03049 344 aa3.47□□□□□ -1.85
RPN8YOR261C NOP6Q07623 225 aaKnown RBP3.47□□□□□ -1.85
RPN8YOR261C TPK3P05986 398 aa3.46□□□□□ -1.86
RPN8YOR261C MID2P36027 376 aa3.46□□□□□ -1.86
RPN8YOR261C GEP4P38812 185 aa3.46□□□□□ -1.86
RPN8YOR261C MLH1P38920 769 aa3.46□□□□□ -1.86
RPN8YOR261C ALD5P40047 520 aaKnown RBP3.46□□□□□ -1.86
RPN8YOR261C LCB2P40970 561 aa3.46□□□□□ -1.86
RPN8YOR261C PGU1P47180 361 aa3.46□□□□□ -1.86
RPN8YOR261C RSC1P53236 928 aa3.46□□□□□ -1.86
RPN8YOR261C RTT102P53330 157 aa3.46□□□□□ -1.86
RPN8YOR261C SKI8Q02793 397 aaPredicted RBP3.46□□□□□ -1.86
RPN8YOR261C COX4P04037 155 aa3.45□□□□□ -1.86
RPN8YOR261C MNE1P24720 663 aa3.45□□□□□ -1.86
RPN8YOR261C FUN26P31381 517 aa3.45□□□□□ -1.86
RPN8YOR261C PFF1P38244 976 aa3.45□□□□□ -1.86
RPN8YOR261C MRPS16Q02608 121 aa3.45□□□□□ -1.86
RPN8YOR261C ASA1Q06822 443 aa3.45□□□□□ -1.86
RPN8YOR261C DNL4Q08387 944 aaPredicted RBP3.45□□□□□ -1.86
RPN8YOR261C YDL199CQ12407 687 aa3.45□□□□□ -1.86
RPN8YOR261C PRB1P09232 635 aa3.44□□□□□ -1.86
RPN8YOR261C RNA1P11745 407 aaKnown RBP3.44□□□□□ -1.86
RPN8YOR261C IES6P32617 166 aa3.44□□□□□ -1.86
RPN8YOR261C KEG1P43614 200 aa3.44□□□□□ -1.86
RPN8YOR261C TRM112P53738 135 aaPredicted RBP3.44□□□□□ -1.86
RPN8YOR261C IPK1Q06667 281 aa3.44□□□□□ -1.86
RPN8YOR261C LDS2Q08218 356 aa3.44□□□□□ -1.86
RPN8YOR261C PAR32Q12515 295 aaKnown RBP3.44□□□□□ -1.86
RPN8YOR261C HTZ1Q12692 134 aaKnown RBP3.44□□□□□ -1.86
RPN8YOR261C ZRC1P20107 442 aa3.43□□□□□ -1.86
RPN8YOR261C ECM8P38246 354 aa3.43□□□□□ -1.86
RPN8YOR261C TIM17P39515 158 aa3.43□□□□□ -1.86
RPN8YOR261C ASN2P49090 572 aaKnown RBP3.43□□□□□ -1.86
RPN8YOR261C MCT1Q12283 360 aa3.43□□□□□ -1.86
RPN8YOR261C GPI18P38211 433 aa3.42□□□□□ -1.86
RPN8YOR261C YHR177WP38867 453 aa3.42□□□□□ -1.86
RPN8YOR261C MNL1P38888 796 aa3.42□□□□□ -1.86
RPN8YOR261C SEO1P39709 593 aa3.42□□□□□ -1.86
RPN8YOR261C YJL055WP47044 245 aa3.42□□□□□ -1.86
RPN8YOR261C YIP5P53108 310 aa3.42□□□□□ -1.86
RPN8YOR261C YGR018CP53211 109 aa3.42□□□□□ -1.86
RPN8YOR261C CCH1P50077 2039 aa3.42□□□□□ -1.86
RPN8YOR261C PSK1P31374 1356 aa3.41□□□□□ -1.86
RPN8YOR261C CBP6P07253 162 aaPredicted RBP3.41□□□□□ -1.86
RPN8YOR261C RRP7P25368 297 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms