RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C HYM1P32464 399 aa5.03□□□□□ -1.6
RAT1YOR048C YPT7P32939 208 aa5.03□□□□□ -1.6
RAT1YOR048C SNU114P36048 1008 aaKnown RBP5.03□□□□□ -1.6
RAT1YOR048C YKL151CP36059 337 aa5.03□□□□□ -1.6
RAT1YOR048C FUI1P38196 639 aa5.03□□□□□ -1.6
RAT1YOR048C PEX32P38292 413 aa5.03□□□□□ -1.6
RAT1YOR048C YHR122WP38829 231 aa5.03□□□□□ -1.6
RAT1YOR048C RPL10P41805 221 aaKnown RBP5.03□□□□□ -1.6
RAT1YOR048C NNF1P47149 201 aa5.03□□□□□ -1.6
RAT1YOR048C YJR120WP47157 116 aa5.03□□□□□ -1.6
RAT1YOR048C PPT1P53043 513 aa5.03□□□□□ -1.6
RAT1YOR048C RRN9P53437 365 aa5.03□□□□□ -1.6
RAT1YOR048C RPL34AP87262 121 aaPredicted RBP5.03□□□□□ -1.6
RAT1YOR048C PLB2Q03674 706 aa5.03□□□□□ -1.6
RAT1YOR048C UTP21Q06078 939 aaPredicted RBP5.03□□□□□ -1.6
RAT1YOR048C MRI1Q06489 411 aaKnown RBP5.03□□□□□ -1.6
RAT1YOR048C TEN1Q07921 160 aa5.03□□□□□ -1.6
RAT1YOR048C YPL272CQ08984 517 aa5.03□□□□□ -1.6
RAT1YOR048C ATP14Q12349 124 aa5.03□□□□□ -1.6
RAT1YOR048C BAR1P12630 587 aa5.02□□□□□ -1.61
RAT1YOR048C PGS1P25578 521 aa5.02□□□□□ -1.61
RAT1YOR048C HMT1P38074 348 aa5.02□□□□□ -1.61
RAT1YOR048C ALG3P38179 458 aa5.02□□□□□ -1.61
RAT1YOR048C SHE1P38200 338 aa5.02□□□□□ -1.61
RAT1YOR048C BSD2P38356 321 aa5.02□□□□□ -1.61
RAT1YOR048C MTG2P38860 518 aa5.02□□□□□ -1.61
RAT1YOR048C NVJ1P38881 321 aa5.02□□□□□ -1.61
RAT1YOR048C QDR1P40475 563 aa5.02□□□□□ -1.61
RAT1YOR048C BIR1P47134 954 aa5.02□□□□□ -1.61
RAT1YOR048C TOM22P49334 152 aa5.02□□□□□ -1.61
RAT1YOR048C BUD9P53226 547 aa5.02□□□□□ -1.61
RAT1YOR048C ERV29P53337 310 aa5.02□□□□□ -1.61
RAT1YOR048C IGO1P53897 168 aa5.02□□□□□ -1.61
RAT1YOR048C PFA5Q03289 374 aa5.02□□□□□ -1.61
RAT1YOR048C RNH202Q05635 350 aa5.02□□□□□ -1.61
RAT1YOR048C YLR352WQ06479 807 aa5.02□□□□□ -1.61
RAT1YOR048C RTT10Q08924 1013 aa5.02□□□□□ -1.61
RAT1YOR048C RPS21AP0C0V8 87 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C SIS1P25294 352 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C RNA14P25298 677 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C ECM34P38728 170 aa5.02□□□□□ -1.61
RAT1YOR048C ERG10P41338 398 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C PET130P47065 347 aa5.02□□□□□ -1.61
RAT1YOR048C RIM21P48565 533 aa5.02□□□□□ -1.61
RAT1YOR048C ARO8P53090 500 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C MKC7P53379 596 aa5.02□□□□□ -1.61
RAT1YOR048C BUD17P53727 317 aa5.02□□□□□ -1.61
RAT1YOR048C COX20Q04935 205 aa5.02□□□□□ -1.61
RAT1YOR048C RTN1Q04947 295 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C ASR1Q06834 288 aa5.02□□□□□ -1.61
RAT1YOR048C RSC58Q07979 502 aa5.02□□□□□ -1.61
RAT1YOR048C SPC3Q12133 184 aa5.02□□□□□ -1.61
RAT1YOR048C NSI1Q12457 570 aa5.02□□□□□ -1.61
RAT1YOR048C SOD2P00447 233 aa5.02□□□□□ -1.61
RAT1YOR048C RPP1BP10622 106 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C MDH1P17505 334 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
RAT1YOR048C PPH22P23595 377 aa5.02□□□□□ -1.61
RAT1YOR048C THI4P32318 326 aa5.02□□□□□ -1.61
RAT1YOR048C SGE1P33335 543 aa5.02□□□□□ -1.61
RAT1YOR048C SPO23P33757 523 aa5.02□□□□□ -1.61
RAT1YOR048C YHR127WP38833 243 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C DDI1P40087 428 aa5.02□□□□□ -1.61
RAT1YOR048C RPL34BP40525 121 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C PKP1P40530 394 aa5.02□□□□□ -1.61
RAT1YOR048C MET28P40573 187 aa5.02□□□□□ -1.61
RAT1YOR048C VNX1P42839 908 aa5.02□□□□□ -1.61
RAT1YOR048C RIM13Q03792 727 aa5.02□□□□□ -1.61
RAT1YOR048C RGC1Q06108 1083 aaKnown RBP5.02□□□□□ -1.61
RAT1YOR048C NUT2Q06213 157 aa5.02□□□□□ -1.61
RAT1YOR048C PHO92Q06390 306 aa5.02□□□□□ -1.61
RAT1YOR048C SYO1Q07395 620 aa5.02□□□□□ -1.61
RAT1YOR048C RTR2Q12378 196 aa5.02□□□□□ -1.61
RAT1YOR048C YDL007C-AQ2V2Q0 85 aa5.02□□□□□ -1.61
RAT1YOR048C LAT1P12695 482 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C STF2P16965 84 aa5.01□□□□□ -1.61
RAT1YOR048C EPT1P22140 391 aa5.01□□□□□ -1.61
RAT1YOR048C GUT1P32190 709 aa5.01□□□□□ -1.61
RAT1YOR048C MTC7P32633 139 aa5.01□□□□□ -1.61
RAT1YOR048C YBR242WP38331 238 aa5.01□□□□□ -1.61
RAT1YOR048C YLF2P38746 405 aa5.01□□□□□ -1.61
RAT1YOR048C GIC1P38785 314 aa5.01□□□□□ -1.61
RAT1YOR048C YNL195CP40168 261 aa5.01□□□□□ -1.61
RAT1YOR048C YFR020WP43600 232 aa5.01□□□□□ -1.61
RAT1YOR048C YJR149WP47177 404 aa5.01□□□□□ -1.61
RAT1YOR048C LSM7P53905 115 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C ISU1Q03020 165 aa5.01□□□□□ -1.61
RAT1YOR048C INP1Q03694 420 aa5.01□□□□□ -1.61
RAT1YOR048C ICL2Q12031 575 aa5.01□□□□□ -1.61
RAT1YOR048C TMS1Q12116 473 aa5.01□□□□□ -1.61
RAT1YOR048C TY1A-NL1Q12391 440 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C LSO1Q3E827 93 aa5.01□□□□□ -1.61
RAT1YOR048C HMG1P12683 1054 aa5.01□□□□□ -1.61
RAT1YOR048C HOM6P31116 359 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C SPS19P32573 292 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C HIS7P33734 552 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C KAE1P36132 386 aa5.01□□□□□ -1.61
RAT1YOR048C TCM62P38228 572 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C FTH1P38310 465 aa5.01□□□□□ -1.61
RAT1YOR048C HTD2P38790 280 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C BIG1P38813 335 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms