RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeast

Gene CKB2, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKB2	YOR039W	YLR111W	Q12528	110 aa		4.77	□□□□□ -1.65
CKB2	YOR039W	YBR255C-A	Q3E776	120 aa		4.77	□□□□□ -1.65
CKB2	YOR039W	NUM1	Q00402	2748 aa		4.77	□□□□□ -1.65
CKB2	YOR039W	MSS18	P08593	268 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	URA4	P20051	364 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	PRP2	P20095	876 aa	Predicted RBP	4.76	□□□□□ -1.65
CKB2	YOR039W	SEC62	P21825	274 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	YCR006C	P25350	157 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	SSH4	P32343	579 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
CKB2	YOR039W	PTH2	P34222	208 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	ASK1	P35734	292 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	VPS21	P36017	210 aa	Known RBP	4.76	□□□□□ -1.65
CKB2	YOR039W	CAB3	P36076	571 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	FTH1	P38310	465 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	MNL1	P38888	796 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	YIL086C	P40503	102 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	APQ12	P40532	138 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	AXL1	P40851	1208 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	SDT1	P53078	280 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	RMI1	Q02685	241 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	PEX25	Q02969	394 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	CSN9	Q03981	162 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	PLM2	Q04383	521 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	TEN1	Q07921	160 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	YPL191C	Q08930	360 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	YMR030W-A	Q3E760	96 aa		4.76	□□□□□ -1.65
CKB2	YOR039W	YPT1	P01123	206 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	ILV2	P07342	687 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	GCD2	P12754	651 aa	Predicted RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	MGR1	P25573	417 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	SIN4	P32259	974 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	NIP1	P32497	812 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	KKQ8	P36004	724 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	SOL2	P37262	315 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	ASC1	P38011	319 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	MET30	P39014	640 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	YHB1	P39676	399 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	XBP1	P40489	647 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	SNO3	P43544	222 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	ARC1	P46672	376 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	URB2	P47108	1174 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	BUD22	Q04347	519 aa	Known RBP	4.75	□□□□□ -1.65
CKB2	YOR039W	YDL121C	Q07541	149 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	YLR053C	Q12026	108 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	HSP42	Q12329	375 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	Q0010	Q9ZZX9	128 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	IRA1	P18963	3092 aa		4.75	□□□□□ -1.65
CKB2	YOR039W	SDH3	P33421	198 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	RPS1A	P33442	255 aa	Known RBP	4.74	□□□□□ -1.65
CKB2	YOR039W	NUP120	P35729	1037 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	BMT2	P38278	337 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	PRP39	P39682	629 aa	Known RBP	4.74	□□□□□ -1.65
CKB2	YOR039W	FRT2	P39734	528 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	YFR020W	P43600	232 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	LIA1	P47120	325 aa	Known RBP	4.74	□□□□□ -1.65
CKB2	YOR039W	IMA1	P53051	589 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	NNF2	P53253	936 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	GTR2	P53290	341 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	BIO4	P53630	237 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	YNL140C	P53910	189 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	ERG13	P54839	491 aa	Known RBP	4.74	□□□□□ -1.65
CKB2	YOR039W	LSM3	P57743	89 aa	Known RBP	4.74	□□□□□ -1.65
CKB2	YOR039W	MRS2	Q01926	470 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	ATG21	Q02887	496 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	YMR209C	Q03648	457 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	YMR155W	Q03795	547 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	STE23	Q06010	1027 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	BOP2	Q06150	570 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	YEH1	Q07804	573 aa		4.74	□□□□□ -1.65
CKB2	YOR039W	IPP1	P00817	287 aa	Known RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	HSC82	P15108	705 aa	Known RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	PHO81	P17442	1178 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	SIP1	P32578	815 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
CKB2	YOR039W	LIN1	P38852	340 aa	Predicted RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	SAP1	P39955	897 aa	Known RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	SEC24	P40482	926 aa	Known RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	GCD10	P41814	478 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	PSA1	P41940	361 aa	Known RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	FAR3	P46671	204 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	YPL071C	Q02864	156 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	YET2	Q04210	160 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	TPO3	Q06451	622 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	RAD34	Q06665	692 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	YOL019W	Q08157	551 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	GET4	Q12125	312 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	NMD4	Q12129	218 aa		4.73	□□□□□ -1.65
CKB2	YOR039W	RRP36	Q12481	300 aa	Predicted RBP	4.73	□□□□□ -1.65
CKB2	YOR039W	CSF1	Q12150	2958 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	STE7	P06784	515 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	GUK1	P15454	187 aa	Known RBP	4.72	□□□□□ -1.65
CKB2	YOR039W	URE2	P23202	354 aa	Known RBP	4.72	□□□□□ -1.65
CKB2	YOR039W	ERG1	P32476	496 aa	Known RBP	4.72	□□□□□ -1.65
CKB2	YOR039W	YCR087C-A	P37263	153 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	IFA38	P38286	347 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	VBA2	P38358	474 aa	Known RBP	4.72	□□□□□ -1.65
CKB2	YOR039W	PHO89	P38361	574 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	YHR210C	P38893	341 aa		4.72	□□□□□ -1.65
CKB2	YOR039W	YIL001W	P40560	513 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms