RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C RDR1Q08904 546 aa3.11□□□□□ -1.91
HRD1YOL013C YLR049CQ12110 428 aa3.11□□□□□ -1.91
HRD1YOL013C YDR262WQ12331 272 aa3.11□□□□□ -1.91
HRD1YOL013C MED4Q12343 284 aa3.11□□□□□ -1.91
HRD1YOL013C ESC1Q03661 1658 aaKnown RBP3.1□□□□□ -1.91
HRD1YOL013C TDH3P00359 332 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
HRD1YOL013C BAR1P12630 587 aa3.1□□□□□ -1.91
HRD1YOL013C MAK32P23060 363 aa3.1□□□□□ -1.91
HRD1YOL013C GPI12P23797 304 aa3.1□□□□□ -1.91
HRD1YOL013C CIN8P27895 1000 aa3.1□□□□□ -1.91
HRD1YOL013C CWP1P28319 239 aa3.1□□□□□ -1.91
HRD1YOL013C ROT2P38138 954 aa3.1□□□□□ -1.91
HRD1YOL013C YER079WP40052 210 aaKnown RBP3.1□□□□□ -1.91
HRD1YOL013C YIL024CP40543 189 aa3.1□□□□□ -1.91
HRD1YOL013C CFD1P40558 293 aa3.1□□□□□ -1.91
HRD1YOL013C HXT9P40885 567 aa3.1□□□□□ -1.91
HRD1YOL013C YDL186WP48568 277 aa3.1□□□□□ -1.91
HRD1YOL013C SCW4P53334 386 aaKnown RBP3.1□□□□□ -1.91
HRD1YOL013C PGA2P53903 129 aa3.1□□□□□ -1.91
HRD1YOL013C KTR6P54070 446 aa3.1□□□□□ -1.91
HRD1YOL013C SNZ1Q03148 297 aa3.1□□□□□ -1.91
HRD1YOL013C YDR387CQ04162 555 aa3.1□□□□□ -1.91
HRD1YOL013C HSP31Q04432 237 aa3.1□□□□□ -1.91
HRD1YOL013C YOR389WQ08912 624 aa3.1□□□□□ -1.91
HRD1YOL013C AHC1Q12433 566 aa3.1□□□□□ -1.91
HRD1YOL013C POL1P13382 1468 aa3.09□□□□□ -1.91
HRD1YOL013C UFD4P33202 1483 aa3.09□□□□□ -1.91
HRD1YOL013C SUC2P00724 532 aa3.09□□□□□ -1.91
HRD1YOL013C MSF1P08425 469 aa3.09□□□□□ -1.91
HRD1YOL013C YLL053CP0CD98 152 aa3.09□□□□□ -1.91
HRD1YOL013C RPL12AP0CX53 165 aaKnown RBP3.09□□□□□ -1.91
HRD1YOL013C RPL12BP0CX54 165 aa3.09□□□□□ -1.91
HRD1YOL013C APA2P22108 325 aa3.09□□□□□ -1.91
HRD1YOL013C RPI1P23250 407 aaKnown RBP3.09□□□□□ -1.91
HRD1YOL013C MSK1P32048 576 aa3.09□□□□□ -1.91
HRD1YOL013C ACH1P32316 526 aa3.09□□□□□ -1.91
HRD1YOL013C RPC25P35718 212 aa3.09□□□□□ -1.91
HRD1YOL013C ASK1P35734 292 aa3.09□□□□□ -1.91
HRD1YOL013C YKL162CP36052 402 aa3.09□□□□□ -1.91
HRD1YOL013C CAB3P36076 571 aa3.09□□□□□ -1.91
HRD1YOL013C YKL023WP36103 277 aaKnown RBP3.09□□□□□ -1.91
HRD1YOL013C OTU1P43558 301 aa3.09□□□□□ -1.91
HRD1YOL013C STE24P47154 453 aa3.09□□□□□ -1.91
HRD1YOL013C CGR1P53188 120 aa3.09□□□□□ -1.91
HRD1YOL013C YNL260CP53846 198 aa3.09□□□□□ -1.91
HRD1YOL013C YPL014WQ02606 381 aa3.09□□□□□ -1.91
HRD1YOL013C SRL4Q03085 281 aa3.09□□□□□ -1.91
HRD1YOL013C MRPS17Q03246 237 aaPredicted RBP3.09□□□□□ -1.91
HRD1YOL013C RSN1Q03516 953 aa3.09□□□□□ -1.91
HRD1YOL013C SMP3Q04174 516 aa3.09□□□□□ -1.91
HRD1YOL013C GPN3Q06543 272 aa3.09□□□□□ -1.91
HRD1YOL013C SYO1Q07395 620 aa3.09□□□□□ -1.91
HRD1YOL013C DNL4Q08387 944 aaPredicted RBP3.09□□□□□ -1.91
HRD1YOL013C LSP1Q12230 341 aaKnown RBP3.09□□□□□ -1.91
HRD1YOL013C GLE1Q12315 538 aa3.09□□□□□ -1.91
HRD1YOL013C FSH3Q99369 266 aa3.09□□□□□ -1.91
HRD1YOL013C YCF1P39109 1515 aaKnown RBP3.09□□□□□ -1.92
HRD1YOL013C DST1P07273 309 aa3.08□□□□□ -1.92
HRD1YOL013C CKI1P20485 582 aa3.08□□□□□ -1.92
HRD1YOL013C RVS161P25343 265 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C CSM1P25651 190 aa3.08□□□□□ -1.92
HRD1YOL013C COQ3P27680 312 aa3.08□□□□□ -1.92
HRD1YOL013C ZUO1P32527 433 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C STV1P37296 890 aa3.08□□□□□ -1.92
HRD1YOL013C PET100P38958 111 aa3.08□□□□□ -1.92
HRD1YOL013C PHB2P50085 310 aa3.08□□□□□ -1.92
HRD1YOL013C SCS3P53012 380 aa3.08□□□□□ -1.92
HRD1YOL013C RET3P53600 189 aa3.08□□□□□ -1.92
HRD1YOL013C REX2P54964 269 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C MRP51Q02950 344 aa3.08□□□□□ -1.92
HRD1YOL013C NUP53Q03790 475 aa3.08□□□□□ -1.92
HRD1YOL013C BTS1Q12051 335 aa3.08□□□□□ -1.92
HRD1YOL013C YOR029WQ12243 111 aa3.08□□□□□ -1.92
HRD1YOL013C PRP46Q12417 451 aaPredicted RBP3.08□□□□□ -1.92
HRD1YOL013C ATG31Q12421 196 aa3.08□□□□□ -1.92
HRD1YOL013C MLP2P40457 1679 aa3.08□□□□□ -1.92
HRD1YOL013C JIP3O13555 125 aa3.08□□□□□ -1.92
HRD1YOL013C ARG4P04076 463 aaPredicted RBP3.08□□□□□ -1.92
HRD1YOL013C RPL24AP04449 155 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C MATALPHA1P0CY06 175 aa3.08□□□□□ -1.92
HRD1YOL013C HMLALPHA1P0CY07 175 aa3.08□□□□□ -1.92
HRD1YOL013C FUS3P16892 353 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C RAD57P25301 460 aa3.08□□□□□ -1.92
HRD1YOL013C YCR016WP25617 290 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C ICL1P28240 557 aaPredicted RBP3.08□□□□□ -1.92
HRD1YOL013C PRO3P32263 286 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C RAD24P32641 659 aa3.08□□□□□ -1.92
HRD1YOL013C PRM9P39551 298 aa3.08□□□□□ -1.92
HRD1YOL013C YIR014WP40570 242 aa3.08□□□□□ -1.92
HRD1YOL013C YJR154WP47181 346 aa3.08□□□□□ -1.92
HRD1YOL013C HOP2P53187 214 aa3.08□□□□□ -1.92
HRD1YOL013C MMT1Q03218 510 aa3.08□□□□□ -1.92
HRD1YOL013C URH1Q04179 340 aa3.08□□□□□ -1.92
HRD1YOL013C MYO5Q04439 1219 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C GTO3Q04806 366 aa3.08□□□□□ -1.92
HRD1YOL013C ASA1Q06822 443 aa3.08□□□□□ -1.92
HRD1YOL013C TSR1Q07381 788 aaKnown RBP3.08□□□□□ -1.92
HRD1YOL013C UBA3Q99344 299 aa3.08□□□□□ -1.92
HRD1YOL013C APE2P32454 952 aaKnown RBP3.07□□□□□ -1.92
HRD1YOL013C SKN1P33336 771 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms